Id Trinity | TRINITY_DN49798_c0_g6_i2 |
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Name Transcript | Ll_transcript_454150 |
Sequence | TTTAAATCCCCCCTTTCACCCTCTCTCTCTTCATAACATTTGCAAGCTATCAATATCCACCACATACAACCCCTTCTTCCCAAAAAAAATATACCAACCT ACACTCTCTACTTTTCTCCCTCTAATTATTTTGCCTTCCATTTTTCACTCTCTTTCTCTTTGCCATGGGCATGGAACCCTTTCCTTGTTTTGAACCAATC TCAAGATGTAGCACAGAACAAAGATCAAACCAAACCGTGGCTTCAGACTTAGATGGCACTCTCCTTGTGTCACGAAGCGCTTTTCCTTATTACCTTCTCA TTGCTCTTGAAGCTGGTAGCATTCTAAGAGCACTAGTGCTTTTAGCTTCTGTCCCTTTTGTTTACTTCACATACATATTTGTCTCTGAAACTGTGGCCAT AAAAACATTGATCTTCATCACCTTCACTGGGTTGAAGATCAGGGACGTTGAGCTTGTGTCAAGGTCAGTGTTGCCAAGGTTCTATGCAGAAGATGTGCAC CCAGAGACATGGAAAGTGTTCAATTCCTTTGGAAAACGATACATTGTTACTGCTAGCCCAAGGTTGATGGTGGAACCATTTGTTAAGACATTTTTGGGAA CTGATAAGGTTATTGGGACAGAACTAGAAACAACAAAATCAGGGAGAGCAACTGGGTTTGTTAAGGAACCTGGTGTTCTTGTTGGTGAACACAAGAAAGC TGCTATTGTCAAAGAATTTGGTCCTGACTTACCAGATTTGGGACTTGGAGATAGTGTAACAGACTATGATTTCATGTCAATCTGCAAGGAAGGATATATA GTTCCAAGGATCAAAGTTGAGCCATTACCAAGAAACAAGCTTCTAAGCCCGATTATTTTCCATGAGGGTAGGCTAGTCCAAAGACCTACCCCTATAGTTA CCCTCTTAACCTTCCTATGGATGCCAATAGGTATTATACTCTCTATCCTTAGGGTATACCTTAACATCCCTTTGCCTGAAAGACTTGCTTGGTACAACTA TAAGCTATTAGGAATCAAGGTCATTAGGAAGGGTAACCCTCCACCAGCCCCTAAGAAAGGTAAAAGTGGAGTCCTATTTGTATGTAACCACAGAACAGTT TTAGACCCAGTTGTTACAGCTGTTGCCCTAGGAAGAAAAATAAGCTGTGTCACTTATAGTATAAGCAAATTCTCTGAAATAATTTCACCAATAAAAGCTG TGGCCCTCACAAGAGAAAGAGATAAAGATGCTGCTAACATTAAGAGACTTCTTGAAGAAGGAGATTTGGTTATTTGTCCTGAAGGTACCACTTGCAGGGA ACCATTTCTGTTAAGGTTCAGTGCTCTTTTTGCTGAGTTGACAGATAGGATTGTCCCAGTTGCCATAAACACAAAGCAAAGTGTGTTTTATGGTACATCA GCTAGAGGTTTTAAATTATTGGACCCTTATTTTGTGTTCATGAATCCAATGCCTACATATGAGATAACTTTCTTGAATCAATTGCCTTCTGAGCTCACTT GCAAAGGTGGAAAATCTGCTATTGAAGTTGCAAATTATATTCAAAGGGTTCTTTCTGGGACTCTTGGCTTTGAGTGCACCAATTTAACAAGGAAGGACAA GTATGCCATGATTGCAGGAACAGATGGAATAGTTCCATCAAAGAAAGAAAAGGCTTGATAAGTAAATCACCTTTTGACTCTCCTTTGTTGCTTAGCTATT TCTTTCCAAAATACTTATAGTTATCATAGTAATAAAAAAATTGATTGTGTTAATTTATGCTAAGCCCATATATATATATATATATACAAGTTAAAGTTTA TATGATGGGGTCAATCTTGATATCTAGTGGTACATTTTTGTGCCAGAAGTTCAATAATCCACATCAATTTTATTTGTTGCTGTTATAAGAAAGTTACTGT AAATATACTGCTGATGGAAATGTGGCATATATAGCAATAAAATTCACAAGGTACACTGATTTTTATAATGCAGTAATGGTATTGCTTTGGTGCCATTAAT TTGCTGAAAATTCTAGCTAGAAGGCTTGCATTCATAACTAGATGTTACACCTCGATATAAAACAATGTACTTGGAACCTTCAAATCTTTGATTCTAAATT ATTTGATAGAAAAATAGTTTGAATATAACATTTGTATCAAACGTGTGGGGGAGTTATTTCCTAGTTGTGAACTCAGTTGATTAAGCTGCAAAATATAAAG TGGACCACTCATTCAAATTGATACCACATCATGTGATGGA BLAST |
Tissue | pods |
Gene name | LI_gene_172293; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_454150
Blastp | Glycerol-3-phosphate 2-O-acyltransferase 6 from Arabidopsis with 80.04% of identity |
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Blastx | Glycerol-3-phosphate 2-O-acyltransferase 6 from Arabidopsis with 80.04% of identity |
Eggnog | glycerol-3-phosphate acyltransferase(ENOG4110PXU) |
Kegg | Link to kegg annotations (AT2G38110) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434982.1) |
Pfam | haloacid dehalogenase-like hydrolase (PF12710.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |