| Id Trinity | TRINITY_DN49799_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_453926 |
| Sequence | GTGTGAACATGAGAGTATGTAAAAGTAGAGTAACAGAAATAGCCTAAAAAGCCTGCGTTCATTTCTCTCATCTCTTTCCCATTTTCGTCGCTATCTCTCT CTCTTTCTCTACACCTTCCCAAACCAAACACTTTCATCTCATTTTCTCAAAAAACCATAACTCGTTTTCATGGCTCACCATCAACTCATCGACTCGCTCA CTTCTCACATTTCTCTTTACCATTCTTCCATTTCAATTTCCCAATCCTCTAACCCTAACCCTAACCCTAACCCACGATCTTCAATTCTCAAATGGTTCTC TTCTCTCACGATCCACCAGCGCCAATCTCATCTCACCATAATTGATCCTACCTTCCTTCAAATCCTTCTCCAAATGCTCTCTAAGCTCCGCGCTAGTGGC CATGGACGATTCATCCTTCTCCCTGATCTTCCCTCGCGGGACCCACCTTTCTTACCCACGCTTTGCTTCAAGAGGTCCGTTGGACTTCTTTCGCGTGTCG CCGACTCGGATGAGTCCGGGCGGTGGCTTTTTGACTCCGCCCGACTGTTTGAGTCGGCCGAAGGTGAGAGTGTTGAGGCCTGCTCGTGCTCTACGAGAGG CCTTGATGGCTTGACGCTGGCTGAGGATTTTTTGGAGAGTGTGGATCGGTTTGTGGAGGTGATGGATGGGATTTCGAATGGCGCGTTTTTGAGAGGGGAG GATTGTGAACTTGGAGAGGATTGTGTGGAGCTGCATTGGCTGAAATCGAAGGGATATTATGGGATTGAGGCGTTTATCGCGAATAGGATTGAGGTTTCGA TGAGGTTGGCTTGGTTGAATAGTAGTGGTGGGAGAAAGAGAGGTGTTAAATTGAAAGAGAAGTTGAACGGAGCGGGTGTCGCGATGAATGTGTTTTGGAG GAGGAAGGGTTGTGTGGACTGGTGGGTGAATCTGGATGCTGCCACGAGGAAGAAGGTCTTGACTACCATCATGAGTAAAGCTGCAAAAAACTTGACTCGT GAGGTTCTGGAAGCGGCAAGTAGTGCCTCTGGGGATGAGGTCTGGCTATACAGCGTGGGAGTTGATAAATTACAGCAATACAGCCGCCCTGCATCAGCTC AAAGGACCATGCGAACGTTTCGTGATGATGTAGAATTTGGATCAGTTGTTACACCAATCACCTTTATTAAAAAACCTGCTGGTTTAGCCAGAGCCATTAA TTCCTTAGTTGTGCTTCAGGACATTAATAAAATTATAACATCATGTCTTAATAGTGAATATGATGTAGGAAAGCTATTTTTCAGTTCGCTGGGTTCTGTT TGTACGATATCTGATTGTATATTACGAAAAATGCGAGGATTTCTGATGGTTATTTCACTTGATTGCACAAAACATGAACTTTTAGACGAGGAAGTTGACA AGCCTTCAGGTAAACCTAAAGAAAAGCCTGGTATTTGTAATCGCAAAAAGAAGGGACGGACTCGCAATACTAAAAGGCAAAATCCTGTCCCAAAGATATG TATGGATGGCATTTCATGTGAAAATCCACCTAAGGACATTGATTATTTAGTGAATAATAAAATGAAAGATGATTTAGCGGCATCCGGGGAACTTCCTGAT GTTCCTTTAGGGAAGGAGATTTCTATGAAGAGCTCATCATCGACTATAAAAATGGTTGCTATCTCTTTTCTTTAATCTGGATCATTGTTTTTGCTAAATA TTTAAGTTTTTTTATAACAAGCCACTTGCCATCAGGATCAATGTCGGGGATTGGGCACTGTTAAACTTCAGTCTACTTCAAGAAGAAGTAGAAAACAGAA AACTAAAAGTAAAAACATCCTTGTTGCGAGTGAGGTTGGAGATTCTCAAAAATCAATTATGGATGTTGCCTCTACTGCTGCTCTTCCTGAAGTTGAAGTG GCAATAAGTGACAGGCATTTTGATAGTTCTACCATGCAGAACATAAAAAATGACAATTCAATTGGTAATGACATCATTGCATCAAATTCAAACCTTTGTA CTTCTCTTAGTGGGCTTACTATGGAGACCAGTTCTACCCGAAAAGTTGAAGGAGAGAATGTTGAAGATCTTCCTGAAAGTTTAGGTCCTCAATGTTGCTT ATTGTCAAATGAAAGGAAAACTCTGTCTTCAGGAATAGATAGTTTAACTTGTGATGCTGATACTAATAAAGTAACTCCTGTACCTGCATTGGTTCGTGGT GCTCTCTTCATCAATGAAGATTCCAGTCCTGTGAATTCAATATGTGCAGCTGAAGCTGGTGCAAGGTCAACTGTTCCTGACAAACCAATCAGAGAGGTTC ACGTGAAAGAATCCGGGCTGTTGATGGGGCAAGATAGATGTCAATTTGAAAGTAGAAATTCAGCTTTAACAAAATGCATTCCATATGAGTGGCCTGGTGT ACCTTCTATCTATTTTCCATCTATTAACTCACACCTTCCTCCTGCTACTGATAGATTGCATCTGGATGCTGGGCGCCATTGGCATAATCACTTCTGTCAC TCATTTGTTCCCACATTACAACAGGCAAGAAATGCACCAATTGAAGGTGGATGCAACCGAATTCTGTCTCATCCAATTCCTATGAGTTTAGACTGGCCCC CAGTTTTTCGTGGTGGCATGGCTCCATCACCAAACTGTAATTACGACTCTGGTTTTATCTCCAGGCGGCAGTGTACCTTTTCAAAAGGGCTGGCCGTTCA CAATGTGCAAGTTGATGCAACAACTCCTGATGATGAAAGAAAGTATTCAGGGGATATGTTTGATTTACCCGATCTAACAAATACACAGGAGCTAGCAGAT GAATTTGAAAATCACTGGGTATCAGAGGAGGAGTATGAGGTTCATGCTGTTTCTGGTTTAGATTGTAATCAATATTTTGGTGGCGGCATAATGTACTGGA ATCCTTCTGATTATCCAGGAACAGGTTTCTCCCGTCCTCCCTCTCTTAGCTCTGATGACAGTTTGTGGGCTTTGCGTGAAGCTGACATGACTAGGACAGT GGATGACATGGTTGCTTTCTCATCTTCGTATAGTACAAACGGGTTGACTTCACCCACTGCTGCTACATTTTGTTCTCCATTTGATCCCGCAGGGACAGGG CCCCAGACTGTCGGTTATGTGATGTCAGGTAATGAAGTATCTGGAAAGGTATTGCATTCTTCATCAGTTACAGATGCAGCAGTGGATGAGGATACTTCTG GTTCTTTGGGCAGTAATTTACCTGGAGATGTTGAAGGGAAGGGAAGCGATTCACATCCTTACCCCATTTTACGGCCAATAATTATTCCTAGCTTGTCAAG GGACAGGTCAAGATCTGACTTTAAGCGTAGTGTTGACCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCAGCCTCGCATAAAACGGCCACCATCA CCTGTAGTGCTGTGTGTTCCACGGGCTCCACGTCCACCCCCACCCTCCCCTGTCAGTGACTCCAGGAAACAAAGGGGTTTTCCAACAGTTAGATCTGGTA GTTCCAGCCCGAGGCACTGGGGAATGAGGGGCTGGTATCATGACGGAAGTAATATGGAAGAAGCTTGTTTAAGAATGGAGGGTGCCGAAGTTGTATGGCC TTCTTGGAGAGGTAATAACCTTAAAGTGCGGCCCATGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGCAATGTCACAGATAGCACGT GACCAGGAACACCCTGATGTCACCATTCCTCTGCAACCTCCCGAGTTACAAAGCTGTTCTTCACTGAGTGCGTCTTTATCTTTGATGCATGGCCTTCTCC ATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGGCCTTACATCAATTGGGCTGTCAAGAGAGTTACCCGATCTCTTCA GGTTCTTTGGCCCAGATCTAGGACTAACATATTTGGTTCAAATGCGACTGGTATGTCTCTTCCAACAAGTGATGTTGACCTTGTTGTTTGTCTCCCTCCA GTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGGAATGGTATTAAAGAAACATGTCTTCAGCACGCAGCTAGGTATCTTGCCAATC AGGATTGGGTAAAAAGTGATTCTCTGAAAACGGTGGAAAATACAGCTATACCTATTATTATGCTCGTGGTGGAAGTGCCACAGGATGTTATCATTTCTTT GGCTCCTATGGTACAATCACTAAAAGAAGAGCCACATGGTACTCCTGGCGGACATGGTAATGAAAGTCATTCTGATATTATCCAATCAGAAGACCCATCT TTCCCAAAAAGCTCTGAAATAAATTCTGATGCCCCAAAAGATTCCAAATCAGTTCGTCTTGACATCAGCTTTAAGTCACCATCACATACAGGACTCCAAA CTACAGAAATGGTTAAGGAGTTGACGGGACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTACTAAAACAGTTCTTGGCAGATCGTAGCCTTGATCAGTC CTATTCTGGTGGCTTAAGTTCCTACTGTTTGGTGTTATTGATCATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGACCAATCAACCAAAACTATGGA AGTCTTCTGATGGATTTTCTTTACTTCTTTGGGAATGTATTTGATCCTCGCCAAATGCGAATATCAGTGCAGGGGAGTGGACTTTATATCAAAAGAGAAA GAGGTTGTAGCATCGATCCAATACACATAGATGATCCTCTTTTCCCAACAAATAATGTGGGAAGGAATTGCTTCCGAATACATCAATGTATTAAGGCTTT TTCAGAAGCTTATTCTGTTCTTGAAAGCGAACTTGTATTCCTAAATAGTGATGCTGAGTCAAGTTCAAGGCGACCTTACAGACTGCTTCCAAAAATCATC CCAAATCTCGATGTATCATAAGATTCTCATTAAATGAAAGATTTATTGTGTGAAGGAGGGCTCATGGTTTGTGCAAGCTATATGCATTTGTCTGTTACTC TGGTCATGTTACATCAAGATGGAAGCTGATCACCCACCCAAGGCAATTATTCCAAATGGTGGGAACTGAAGTTAGGCAATGTAATATCTTTCTCATGCCT AGACCTCCAAGCATTGGGTATGCTGATGTTTTCTAGCAATTTTGTTCATAATTTACTTTTGTTGTACATGGTGCAAACTGCAAAGAACTAGGTTAGTTCT GCATGCTACACATTGTAATATCTTCAGTTCTGCTGGATCATCTTGGCTGGTTGAAACTACTTTTTGGAAATCAGAAGCAGTTTTGGTTCTTCTTGTGTAA GTAGTCTTTATTAATCCTAGCAAGCAAATGCAGGTCCATGAAGTATGGAAGTTGATGTGAAGATTTGAAGATGGTAATTTGATACACAAGAGTGACCTTT GAGCGTCTTCATGACCAAGAATGGCAGCACCAGGCCAGTTTATCACTGCCCTTAAACTTCATGAACACATTTATTTATTTGTTTATCTTCATTGATCATA CTTTATTGGTTTATGTATCCTTATTTAACCATCCAAACTCAAATCTCTTTCCAACATTTTGGAGCTTTTTTTTTGGGTTTTGTTTCTTGGATGTCGTGAG GGCCTAATTTGGTTAAGTATATGGACAAAGTACCACTTATAAGCTATAATGGCTTTTGGGAATCCTCCCCTCTTGAGCTAGCTTTAGGATTGGAGTCTAT TGTAGTTGTGTCAATGTTATATCTCTCTTATTCTTATTGGCATCAGTGCCTATATTGGAAACTTCACTCTAAATGTGGTTGTGAGAAGGGTGTTTTAACG GCCCATATTGGTTAATTACCCCTTTTAATGACTTGGCAAATCCTCTACCTTATGAGCTAGTTTTTGAGGTAGACCTGAACCCACTTATTTTAATGTGCAA TTATTTGAAGAGCAGGGGGTTTTGAAGTTAATCTTCCAGCAAGTTATTTACCTAGATATTTGGTCTCTCTCTTTTTTACACCTCAACTATCACGGCCAAC TTCGATTTGCAATTCAACTGTGATTGCTTATTTGTCGGGAGGAATTCATTTTTGAAATTAATATGGTCAATTTCTGCTAACTGATTGGCTGAAAGTTTTT TGTTGCTATAGAAAACTTGGCAAAAACAGCATGATCAGTAAAAACAATTTCCTGGATTGTATTTGAAATTCATAGATGAATAAGCCATGATGTGATGGTA AGGTTGGCATAAGACTTAGTAATCACAGGTTCTAGTTGTGTCGACAAGCTATACTGATAGGGTTTCTTGATCATTTATATGCATCAAAGTACAGTGTAGA CCTGAAGAACCAGGGTTTTATTGCAATTTAAGAACCTCAAATTGCAATTTAATGTGATTTTTTATTGCCATCAGGGCTTACTGCTGGAAAAATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172307; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_453926
| Blastp | Non-canonical poly(A) RNA polymerase PAPD7 from Homo with 34.18% of identity |
|---|---|
| Blastx | Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 33.67% of identity |
| Eggnog | domain) containing(COG5260) |
| Kegg | Link to kegg annotations (11044) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463331.1) |
| Pfam | Nucleotidyltransferase domain (PF01909.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |