| Id Trinity | TRINITY_DN49799_c4_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_453936 |
| Sequence | GTGTGAACATGAGAGTATGTAAAAGTAGAGTAACAGAAATAGCCTAAAAAGCCTGCGTTCATTTCTCTCATCTCTTTCCCATTTTCGTCGCTATCTCTCT CTCTTTCTCTACACCTTCCCAAACCAAACACTTTCATCTCATTTTCTCAAAAAACCATAACTCGTTTTCATGGCTCACCATCAACTCATCGACTCGCTCA CTTCTCACATTTCTCTTTACCATTCTTCCATTTCAATTTCCCAATCCTCTAACCCTAACCCTAACCCTAACCCACGATCTTCAATTCTCAAATGGTTCTC TTCTCTCACGATCCACCAGCGCCAATCTCATCTCACCATAATTGATCCTACCTTCCTTCAAATCCTTCTCCAAATGCTCTCTAAGCTCCGCGCTAGTGGC CATGGACGATTCATCCTTCTCCCTGATCTTCCCTCGCGGGACCCACCTTTCTTACCCACGCTTTGCTTCAAGAGGTCCGTTGGACTTCTTTCGCGTGTCG CCGACTCGGATGAGTCCGGGCGGTGGCTTTTTGACTCCGCCCGACTGTTTGAGTCGGCCGAAGGTGAGAGTGTTGAGGCCTGCTCGTGCTCTACGAGAGG CCTTGATGGCTTGACGCTGGCTGAGGATTTTTTGGAGAGTGTGGATCGGTTTGTGGAGGTGATGGATGGGATTTCGAATGGCGCGTTTTTGAGAGGGGAG GATTGTGAACTTGGAGAGGATTGTGTGGAGCTGCATTGGCTGAAATCGAAGGGATATTATGGGATTGAGGCGTTTATCGCGAATAGGATTGAGGTTTCGA TGAGGTTGGCTTGGTTGAATAGTAGTGGTGGGAGAAAGAGAGGTGTTAAATTGAAAGAGAAGTTGAACGGAGCGGGTGTCGCGATGAATGTGTTTTGGAG GAGGAAGGGTTGTGTGGACTGGTGGGTGAATCTGGATGCTGCCACGAGGAAGAAGGTCTTGACTACCATCATGAGTAAAGCTGCAAAAAACTTGACTCGT GAGGTTCTGGAAGCGGCAAGTAGTGCCTCTGGGGATGAGGTCTGGCTATACAGCGTGGGAGTTGATAAATTACAGCAATACAGCCGCCCTGCATCAGCTC AAAGGACCATGCGAACGTTTCGTGATGATGTAGAATTTGGATCAGTTGTTACACCAATCACCTTTATTAAAAAACCTGCTGGTTTAGCCAGAGCCATTAA TTCCTTAGTTGTGCTTCAGGACATTAATAAAATTATAACATCATGTCTTAATAGTGAATATGATGTAGGAAAGCTATTTTTCAGTTCGCTGGGTTCTGTT TGTACGATATCTGATTGTATATTACGAAAAATGCGAGGATTTCTGATGGTTATTTCACTTGATTGCACAAAACATGAACTTTTAGACGAGGAAGTTGACA AGCCTTCAGGTAAACCTAAAGAAAAGCCTGGTATTTGTAATCGCAAAAAGAAGGGACGGACTCGCAATACTAAAAGGCAAAATCCTGTCCCAAAGATATG TATGGATGGCATTTCATGTGAAAATCCACCTAAGGACATTGATTATTTAGTGAATAATAAAATGAAAGATGATTTAGCGGCATCCGGGGAACTTCCTGAT GTTCCTTTAGGGAAGGAGATTTCTATGAAGAGCTCATCATCGACTATAAAAATGGATCAATGTCGGGGATTGGGCACTGTTAAACTTCAGTCTACTTCAA GAAGAAGTAGAAAACAGAAAACTAAAAGTAAAAACATCCTTGTTGCGAGTGAGGTTGGAGATTCTCAAAAATCAATTATGGATGTTGCCTCTACTGCTGC TCTTCCTGAAGTTGAAGTGGCAATAAGTGACAGGCATTTTGATAGTTCTACCATGCAGAACATAAAAAATGACAATTCAATTGGTAATGACATCATTGCA TCAAATTCAAACCTTTGTACTTCTCTTAGTGGGCTTACTATGGAGACCAGTTCTACCCGAAAAGTTGAAGGAGAGAATGTTGAAGATCTTCCTGAAAGTT TAGGTCCTCAATGTTGCTTATTGTCAAATGAAAGGAAAACTCTGTCTTCAGGAATAGATAGTTTAACTTGTGATGCTGATACTAATAAAGTAACTCCTGT ACCTGCATTGGTTCGTGGTGCTCTCTTCATCAATGAAGATTCCAGTCCTGTGAATTCAATATGTGCAGCTGAAGCTGGTGCAAGGTCAACTGTTCCTGAC AAACCAATCAGAGAGGTTCACGTGAAAGAATCCGGGCTGTTGATGGGGCAAGATAGATGTCAATTTGAAAGTAGAAATTCAGCTTTAACAAAATGCATTC CATATGAGTGGCCTGGTGTACCTTCTATCTATTTTCCATCTATTAACTCACACCTTCCTCCTGCTACTGATAGATTGCATCTGGATGCTGGGCGCCATTG GCATAATCACTTCTGTCACTCATTTGTTCCCACATTACAACAGGCAAGAAATGCACCAATTGAAGGTGGATGCAACCGAATTCTGTCTCATCCAATTCCT ATGAGTTTAGACTGGCCCCCAGTTTTTCGTGGTGGCATGGCTCCATCACCAAACTGTAATTACGACTCTGGTTTTATCTCCAGGCGGCAGTGTACCTTTT CAAAAGGGCTGGCCGTTCACAATGTGCAAGTTGATGCAACAACTCCTGATGATGAAAGAAAGTATTCAGGGGATATGTTTGATTTACCCGATCTAACAAA TACACAGGAGCTAGCAGATGAATTTGAAAATCACTGGGTATCAGAGGAGGAGTATGAGGTTCATGCTGTTTCTGGTTTAGATTGTAATCAATATTTTGGT GGCGGCATAATGTACTGGAATCCTTCTGATTATCCAGGAACAGGTTTCTCCCGTCCTCCCTCTCTTAGCTCTGATGACAGTTTGTGGGCTTTGCGTGAAG CTGACATGACTAGGACAGTGGATGACATGGTTGCTTTCTCATCTTCGTATAGTACAAACGGGTTGACTTCACCCACTGCTGCTACATTTTGTTCTCCATT TGATCCCGCAGGGACAGGGCCCCAGACTGTCGGTTATGTGATGTCAGGTAATGAAGTATCTGGAAAGGTATTGCATTCTTCATCAGTTACAGATGCAGCA GTGGATGAGGATACTTCTGGTTCTTTGGGCAGTAATTTACCTGGAGATGTTGAAGGGAAGGGAAGCGATTCACATCCTTACCCCATTTTACGGCCAATAA TTATTCCTAGCTTGTCAAGGGACAGGTCAAGATCTGACTTTAAGCGTAGTGTTGACCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCAGCCTCG CATAAAACGGCCACCATCACCTGTAGTGCTGTGTGTTCCACGGGCTCCACGTCCACCCCCACCCTCCCCTGTCAGTGACTCCAGGAAACAAAGGGGTTTT CCAACAGTTAGATCTGGTAGTTCCAGCCCGAGGCACTGGGGAATGAGGGGCTGGTATCATGACGGAAGTAATATGGAAGAAGCTTGTTTAAGAATGGAGG GTGCCGAAGTTGTATGGCCTTCTTGGAGAGGTAATAACCTTAAAGTGCGGCCCATGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGC AATGTCACAGATAGCACGTGACCAGGAACACGTAAGAATGATCCTTACCTAAGTCCTACCTTACAGATATATGTTGGTGTTCATTGTGGGTTTTTAATTA TACAGCCTGATGTCACCATTCCTCTGCAACCTCCCGAGTTACAAAGCTGTTCTTCACTGAGTGCGTCTTTATCTTTGATGCATGGCCTTCTCCATGATGA GATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGGCCTTACATCAATTGGGCTGTCAAGAGAGTTACCCGATCTCTTCAGGTTCTT TGGCCCAGATCTAGGACTAACATATTTGGTTCAAATGCGACTGGTATGTCTCTTCCAACAAGTGATGTTGACCTTGTTGTTTGTCTCCCTCCAGTGAGGA ACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGGAATGGTATTAAAGAAACATGTCTTCAGCACGCAGCTAGGTATCTTGCCAATCAGGATTG GGTAAAAAGTGATTCTCTGAAAACGGTGGAAAATACAGCTATACCTATTATTATGCTCGTGGTGGAAGTGCCACAGGATGTTATCATTTCTTTGGCTCCT ATGGTACAATCACTAAAAGAAGAGCCACATGGTACTCCTGGCGGACATGGTAATGAAAGTCATTCTGATATTATCCAATCAGAAGACCCATCTTTCCCAA AAAGCTCTGAAATAAATTCTGATGCCCCAAAAGATTCCAAATCAGTTCGTCTTGACATCAGCTTTAAGTCACCATCACATACAGGACTCCAAACTACAGA AATGGTTAAGGAGTTGACGGGACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTACTAAAACAGTTCTTGGCAGATCGTAGCCTTGATCAGTCCTATTCT GGTGGCTTAAGTTCCTACTGTTTGGTGTTATTGATCATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGACCAATCAACCAAAACTATGGAAGTCTTC TGATGGATTTTCTTTACTTCTTTGGGAATGTATTTGATCCTCGCCAAATGCGAATATCAGTGCAGGGGAGTGGACTTTATATCAAAAGAGAAAGAGGTTG TAGCATCGATCCAATACACATAGATGATCCTCTTTTCCCAACAAATAATGTGGGAAGGAATTGCTTCCGAATACATCAATGTATTAAGGCTTTTTCAGAA GCTTATTCTGTTCTTGAAAGCGAACTTGTATTCCTAAATAGTGATGCTGAGTCAAGTTCAAGGCGACCTTACAGACTGCTTCCAAAAATCATCCCAAATC TCGATGTATCATAAGATTCTCATTAAATGAAAGATTTATTGTGTGAAGGAGGGCTCATGGTTTGTGCAAGCTATATGCATTTGTCTGTTACTCTGGTCAT GTTACATCAAGATGGAAGCTGATCACCCACCCAAGGCAATTATTCCAAATGGTGGGAACTGAAGTTAGGCAATGTAATATCTTTCTCATGCCTAGACCTC CAAGCATTGGGTATGCTGATGTTTTCTAGCAATTTTGTTCATAATTTACTTTTGTTGTACATGGTGCAAACTGCAAAGAACTAGGTTAGTTCTGCATGCT ACACATTGTAATATCTTCAGTTCTGCTGGATCATCTTGGCTGGTTGAAACTACTTTTTGGAAATCAGAAGCAGTTTTGGTTCTTCTTGTGTAAGTAGTCT TTATTAATCCTAGCAAGCAAATGCAGGTCCATGAAGTATGGAAGTTGATGTGAAGATTTGAAGATGGTAATTTGATACACAAGAGTGACCTTTGAGCGTC TTCATGACCAAGAATGGCAGCACCAGGCCAGTTTATCACTGCCCTTAAACTTCATGAACACATTTATTTATTTGTTTATCTTCATTGATCATACTTTATT GGTTTATGTATCCTTATTTAACCATCCAAACTCAAATCTCTTTCCAACATTTTGGAGCTTTTTTTTTGGGTTTTGTTTCTTGGATGTCGTGAGGGCCTAA TTTGGTTAAGTATATGGACAAAGTACCACTTATAAGCTATAATGGCTTTTGGGAATCCTCCCCTCTTGAGCTAGCTTTAGGATTGGAGTCTATTGTAGTT GTGTCAATGTTATATCTCTCTTATTCTTATTGGCATCAGTGCCTATATTGGAAACTTCACTCTAAATGTGGTTGTGAGAAGGGTGTTTTAACGGCCCATA TTGGTTAATTACCCCTTTTAATGACTTGGCAAATCCTCTACCTTATGAGCTAGTTTTTGAGGTAGACCTGAACCCACTTATTTTAATGTGCAATTATTTG AAGAGCAGGGGGTTTTGAAGTTAATCTTCCAGCAAGTTATTTACCTAGATATTTGGTCTCTCTCTTTTTTACACCTCAACTATCACGGCCAACTTCGATT TGCAATTCAACTGTGATTGCTTATTTGTCGGGAGGAATTCATTTTTGAAATTAATATGGTCAATTTCTGCTAACTGATTGGCTGAAAGTTTTTTGTTGCT ATAGAAAACTTGGCAAAAACAGCATGATCAGTAAAAACAATTTCCTGGATTGTATTTGAAATTCATAGATGAATAAGCCATGATGTGATGGTAAGGTTGG CATAAGACTTAGTAATCACAGGTTCTAGTTGTGTCGACAAGCTATACTGATAGGGTTTCTTGATCATTTATATGCATCAAAGTACAGTGTAGACCTGAAG AACCAGGGTTTTATTGCAATTTAAGAACCTCAAATTGCAATTTAATGTGATTTTTTATTGCCATCAGGGCTTACTGCTGGAAAAATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172307; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_453936
| Blastp | - |
|---|---|
| Blastx | Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 33.67% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463331.1) |
| Pfam | - |
| Rfam | - |
| GO | - |