Ll_transcript_453931

• Id Trinity: TRINITY_DN49799_c4_g1_i6
• Name Transcript: Ll_transcript_453931
• Sequence: GTGTGAACATGAGAGTATGTAAAAGTAGAGTAACAGAAATAGCCTAAAAAGCCTGCGTTCATTTCTCTCATCTCTTTCCCATTTTCGTCGCTATCTCTCT CTCTTTCTCTACACCTTCCCAAACCAAACACTTTCATCTCATTTTCTCAAAAAACCATAACTCGTTTTCATGGCTCACCATCAACTCATCGACTCGCTCA CTTCTCACATTTCTCTTTACCATTCTTCCATTTCAATTTCCCAATCCTCTAACCCTAACCCTAACCCTAACCCACGATCTTCAATTCTCAAATGGTTCTC TTCTCTCACGATCCACCAGCGCCAATCTCATCTCACCATAATTGATCCTACCTTCCTTCAAATCCTTCTCCAAATGCTCTCTAAGCTCCGCGCTAGTGGC CATGGACGATTCATCCTTCTCCCTGATCTTCCCTCGCGGGACCCACCTTTCTTACCCACGCTTTGCTTCAAGAGGTCCGTTGGACTTCTTTCGCGTGTCG CCGACTCGGATGAGTCCGGGCGGTGGCTTTTTGACTCCGCCCGACTGTTTGAGTCGGCCGAAGGTGAGAGTGTTGAGGCCTGCTCGTGCTCTACGAGAGG CCTTGATGGCTTGACGCTGGCTGAGGATTTTTTGGAGAGTGTGGATCGGTTTGTGGAGGTGATGGATGGGATTTCGAATGGCGCGTTTTTGAGAGGGGAG GATTGTGAACTTGGAGAGGATTGTGTGGAGCTGCATTGGCTGAAATCGAAGGGATATTATGGGATTGAGGCGTTTATCGCGAATAGGATTGAGGTTTCGA TGAGGTTGGCTTGGTTGAATAGTAGTGGTGGGAGAAAGAGAGGTGTTAAATTGAAAGAGAAGTTGAACGGAGCGGGTGTCGCGATGAATGTGTTTTGGAG GAGGAAGGGTTGTGTGGACTGGTGGGTGAATCTGGATGCTGCCACGAGGAAGAAGGTCTTGACTACCATCATGAGTAAAGCTGCAAAAAACTTGACTCGT GAGGTTCTGGAAGCGGCAAGTAGTGCCTCTGGGGATGAGGTCTGGCTATACAGCGTGGGAGTTGATAAATTACAGCAATACAGCCGCCCTGCATCAGCTC AAAGGACCATGCGAACGTTTCGTGATGATGTAGAATTTGGATCAGTTGTTACACCAATCACCTTTATTAAAAAACCTGCTGGTTTAGCCAGAGCCATTAA TTCCTTAGTTGTGCTTCAGGACATTAATAAAATTATAACATCATGTCTTAATAGTGAATATGATGTAGGAAAGCTATTTTTCAGTTCGCTGGGTTCTGTT TGTACGATATCTGATTGTATATTACGAAAAATGCGAGGATTTCTGATGGTTATTTCACTTGATTGCACAAAACATGAACTTTTAGACGAGGAAGTTGACA AGCCTTCAGGTAAACCTAAAGAAAAGCCTGGTATTTGTAATCGCAAAAAGAAGGGACGGACTCGCAATACTAAAAGGCAAAATCCTGTCCCAAAGATATG TATGGATGGCATTTCATGTGAAAATCCACCTAAGGACATTGATTATTTAGTGAATAATAAAATGAAAGATGATTTAGCGGCATCCGGGGAACTTCCTGAT GTTCCTTTAGGGAAGGAGATTTCTATGAAGAGCTCATCATCGACTATAAAAATGGATCAATGTCGGGGATTGGGCACTGTTAAACTTCAGTCTACTTCAA GAAGAAGTAGAAAACAGAAAACTAAAAGTAAAAACATCCTTGTTGCGAGTGAGGTTGGAGATTCTCAAAAATCAATTATGGATGTTGCCTCTACTGCTGC TCTTCCTGAAGTTGAAGTGGCAATAAGTGACAGGCATTTTGATAGTTCTACCATGCAGAACATAAAAAATGACAATTCAATTGGTAATGACATCATTGCA TCAAATTCAAACCTTTGTACTTCTCTTAGTGGGCTTACTATGGAGACCAGTTCTACCCGAAAAGTTGAAGGAGAGAATGTTGAAGATCTTCCTGAAAGTT TAGGTCCTCAATGTTGCTTATTGTCAAATGAAAGGAAAACTCTGTCTTCAGGAATAGATAGTTTAACTTGTGATGCTGATACTAATAAAGTAACTCCTGT ACCTGCATTGGTTCGTGGTGCTCTCTTCATCAATGAAGATTCCAGTCCTGTGAATTCAATATGTGCAGCTGAAGCTGGTGCAAGGTCAACTGTTCCTGAC AAACCAATCAGAGAGGTTCACGTGAAAGAATCCGGGCTGTTGATGGGGCAAGATAGATGTCAATTTGAAAGTAGAAATTCAGCTTTAACAAAATGCATTC CATATGAGTGGCCTGGTGTACCTTCTATCTATTTTCCATCTATTAACTCACACCTTCCTCCTGCTACTGATAGATTGCATCTGGATGCTGGGCGCCATTG GCATAATCACTTCTGTCACTCATTTGTTCCCACATTACAACAGGCAAGAAATGCACCAATTGAAGGTGGATGCAACCGAATTCTGTCTCATCCAATTCCT ATGAGTTTAGACTGGCCCCCAGTTTTTCGTGGTGGCATGGCTCCATCACCAAACTGTAATTACGACTCTGGTTTTATCTCCAGGCGGCAGTGTACCTTTT CAAAAGGGCTGGCCGTTCACAATGTGCAAGTTGATGCAACAACTCCTGATGATGAAAGAAAGTATTCAGGGGATATGTTTGATTTACCCGATCTAACAAA TACACAGGAGCTAGCAGATGAATTTGAAAATCACTGGGTATCAGAGGAGGAGTATGAGGTTCATGCTGTTTCTGGTTTAGATTGTAATCAATATTTTGGT GGCGGCATAATGTACTGGAATCCTTCTGATTATCCAGGAACAGGTTTCTCCCGTCCTCCCTCTCTTAGCTCTGATGACAGTTTGTGGGCTTTGCGTGAAG CTGACATGACTAGGACAGTGGATGACATGGTTGCTTTCTCATCTTCGTATAGTACAAACGGGTTGACTTCACCCACTGCTGCTACATTTTGTTCTCCATT TGATCCCGCAGGGACAGGGCCCCAGACTGTCGGTTATGTGATGTCAGGTAATGAAGTATCTGGAAAGGTATTGCATTCTTCATCAGTTACAGATGCAGCA GTGGATGAGGATACTTCTGGTTCTTTGGGCAGTAATTTACCTGGAGATGTTGAAGGGAAGGGAAGCGATTCACATCCTTACCCCATTTTACGGCCAATAA TTATTCCTAGCTTGTCAAGGGACAGGTCAAGATCTGACTTTAAGCGTAGTGTTGACCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCAGCCTCG CATAAAACGGCCACCATCACCTGTAGTGCTGTGTGTTCCACGGGCTCCACGTCCACCCCCACCCTCCCCTGTCAGTGACTCCAGGAAACAAAGGGGTTTT CCAACAGTTAGATCTGGTAGTTCCAGCCCGAGGCACTGGGGAATGAGGGGCTGGTATCATGACGGAAGTAATATGGAAGAAGCTTGTTTAAGAATGGAGG GTGCCGAAGTTGTATGGCCTTCTTGGAGAGGTAATAACCTTAAAGTGCGGCCCATGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGC AATGTCACAGATAGCACGTGACCAGGAACACCCTGATGTCACCATTCCTCTGCAACCTCCCGAGTTACAAAGCTGTTCTTCACTGAGTGCGTCTTTATCT TTGATGCATGGCCTTCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGGCCTTACATCAATTGGGCTGTCAAGA GAGTTACCCGATCTCTTCAGGTTCTTTGGCCCAGATCTAGGACTAACATATTTGGTTCAAATGCGACTGGTATGTCTCTTCCAACAAGTGATGTTGACCT TGTTGTTTGTCTCCCTCCAGTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGGAATGGTATTAAAGAAACATGTCTTCAGCACGCA GCTAGGTATCTTGCCAATCAGGATTGGGTAAAAAGTGATTCTCTGAAAACGGTGGAAAATACAGCTATACCTATTATTATGCTCGTGGTGGAAGTGCCAC AGGATGTTATCATTTCTTTGGCTCCTATGGTACAATCACTAAAAGAAGAGCCACATGGTACTCCTGGCGGACATGGTAATGAAAGTCATTCTGATATTAT CCAATCAGAAGACCCATCTTTCCCAAAAAGCTCTGAAATAAATTCTGATGCCCCAAAAGATTCCAAATCAGTTCGTCTTGACATCAGCTTTAAGTCACCA TCACATACAGGACTCCAAACTACAGAAATGGTTAAGGAGTTGACGGGACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTACTAAAACAGTTCTTGGCAG ATCGTAGCCTTGATCAGTCCTATTCTGGTGGCTTAAGTTCCTACTGTTTGGTGTTATTGATCATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGACC AATCAACCAAAACTATGGAAGTCTTCTGATGGATTTTCTTTACTTCTTTGGGAATGTATTTGATCCTCGCCAAATGCGAATATCAGTGCAGGGGAGTGGA CTTTATATCAAAAGAGAAAGAGGTTGTAGCATCGATCCAATACACATAGATGATCCTCTTTTCCCAACAAATAATGTGGGAAGGAATTGCTTCCGAATAC ATCAATGTATTAAGGCTTTTTCAGAAGCTTATTCTGTTCTTGAAAGCGAACTTGTATTCCTAAATAGTGATGCTGAGTCAAGTTCAAGGCGACCTTACAG ACTGCTTCCAAAAATCATCCCAAATCTCGATGTATCATAAGATTCTCATTAAATGAAAGATTTATTGTGTGAAGGAGGGCTCATGGTTTGTGCAAGCTAT ATGCATTTGTCTGTTACTCTGGTCATGTTACATCAAGATGGAAGCTGATCACCCACCCAAGGCAATTATTCCAAATGGTGGGAACTGAAGTTAGGCAATG TAATATCTTTCTCATGCCTAGACCTCCAAGCATTGGGTATGCTGATGTTTTCTAGCAATTTTGTTCATAATTTACTTTTGTTGTACATGGTGCAAACTGC AAAGAACTAGGTTAGTTCTGCATGCTACACATTGTAATATCTTCAGTTCTGCTGGATCATCTTGGCTGGTTGAAACTACTTTTTGGAAATCAGAAGCAGT TTTGGTTCTTCTTGTGTAAGTAGTCTTTATTAATCCTAGCAAGCAAATGCAGGTCCATGAAGTATGGAAGTTGATGTGAAGATTTGAAGATGGTAATTTG ATACACAAGAGTGACCTTTGAGCGTCTTCATGACCAAGAATGGCAGCACCAGGGCTTACTGCTGGAAAAATAATTGCAATCTAGTTCGACAGATTATTGA AAAGGGCAATATACTTCGGTAATCTCTCGAGGTTTGATGAACTCAAAATGCAGTGATAATGCAAAGTTTCTGGTGTATCACCTCTGGCATGAGGTTTCTC AAGTTTTTAAATTGAGGGTCCTCCTTCCCTCAAATCATGGGATAGTAATCAGATGAAGTGTAAATCGGCTGAAGAACTTGGATGGAGATGATTGCGGGAG GAATTGTGACATGATAAAATCATCTGACAACAACAAAGTCTCGGATGGAGTCGGCTACATGGATCGGAAGATGTCATATGCTCTATTATAAATCATCTTA GTTTATTAAAAAATAGGTTGTTGAGCATTAAGGTACTGTGTGTACAAAGATGCTTCATCTTTCTCCATTGTTATCCCATCTATAAACACAGGAGATAGAT TTTGCAAGTGTTTCTGCTCAGGCTGAACAAAACATGGACTAATGTAGTTGGATGATTCACTTACATTCTTTTGTCTAAATTTTATGTTGCACTTTTAAAA TCTAATAATTGGTTCTAATTGGGTTGGATAGTTGATTTATTTTACTTCATATCCGAACCAAACTAGTTACAACTGTTCAACTCTCA
• Tissue: pods
• Gene name: LI_gene_172307;
• Additional information: details;

Expression of Ll_transcript_453931

FPKM

• PAB: 5.9
• PNAB: 4
• PS1: 5.3
• PS2: 4.8
• PS3: 5.5
• PW1: 5.2
• PW2: 4.1
• PW3: 4.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_453931

• Blastp: Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 33.67% of identity
• Blastx: Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 33.67% of identity
• Eggnog: domain) containing(COG5260)
• Kegg: Link to kegg annotations (210106)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463331.1)
• Pfam: Nucleotidyltransferase domain (PF01909.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;