| Id Trinity | TRINITY_DN49800_c1_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_342180 |
| Sequence | GTTTTCTTCATAATTGAATTTTCAGTTCGTGTTTTTTTATTGTAGTAATTGAGTATTTTTGGATTCTAAATTATACAAGTTTTACGTTATTTTCTACTTT TATGATTGTCTCCTGAGTTGTAAAGTCTTCTTCTCAGTTTTCTCATTGCACTTGTCTTCAGCTTCAATTACGCAAGTTTTACAAATTTGAAATCTTTTTT GGAGATTTATGTTTTGTGCAATTCGTTGACTCGTTTAAAGCTTAAGGGTGTTTAAGGTTGTTTTTAAATGATTATTTTTATCACAAAATCATTTATGGGC TTTGGTGCTTGCACATTTCTTTGACTGGGAATAGTTAGCCTTTTATAAATAAGCAGAAGCTGAATTACAGCTTTTTACATGAAATTTTCATCTTCTAAAT AAAATCATTTTTTTAAAATCTAAACAAGTGGGTCCCTAAATCATTTGTTTCCCTTTATTTGTTTTTCTTTGCTTTTTTTCTTCTGTTCTAAACTTGTTGA TGGAGAATTAAAGAAAACAAGTAGCCTATGTTCAAACTGGATGATATATTTGCTGGATCTGCAATGAAATTTTGTATTATGGGATCATTCGATCAATGTA GCCGACCTTGCTTAGTGGGATAAATGTTTGGTTGTTGTTGTTGATTGATGAAGGATAAACACTTTACAAGAATCAATTGAAAAAATCAGCTTATTTGTGA TTTTGAAGATATATTTTCTTAATCTTTGGATGAAAATATTTTGAAGGTTTTGCAGGCTATTTGGAGAGCAATAAGATATAATGGCTGCTAGGATACCTGG TTTAATTGCTTTATTTGATGTTGATGGAACTCTTACAGCTCCGAGGAAGGTATCTATTTCTTATAAAGCTTTACCCTTCATTTGTATGGTTGTTCTGTTA TGATTTTAACTGCAAGGTACATCAGATGCAGCATTTTGAAATCGTTCTGTACCAAATCTATTATATTAAAGTCATCTGAAGTTACTTTAGCTGTTCACTC ATCGTAAAAAGAATTTGCGCCCCTCTCTGAACAAGAACAAAACTACAGATCTGGGTGTATTATTTTAGTTGTTTAGCATTGCATTACATCTATTTAATGT TTCTTATTCAAATGCAAGGTGGTTACTCCAGAGATGTTAAAGTTCATGCAAGAACTACGGAAGGTTGTAACAATTGGAGTTGTTGGTGGATCCGATTTTG TGAAGATATCTGAGCAACTTGGGAATACAGTTACCAATGACTATGATTACGTATTTTCTGAGAATGGTCTTCTGGCTCATAAGGAGGGAAAGCTCATTGG AATCCAGAGCTTGAAGGACTTCATTGGGGAAGAAAAGCTCAAGGAAATTATCAACTTTACACTTCATTACATTGCTGATTTGGATATCCCAATTAAAAGG GGTACATTTATAGAGTTCCGCAGCGGTATGCTGAATGTGTCACCAATTGGGAGAAACTGCAGCCAAGAAGAAAGAGATGAATTTGAGAAGTATGACAAGG TTCAGAACATACGTTCAAAAATGGTTTCTGTACTTCGAGAGAAATTTGCTCATCTTAACTTGACATTTTCCATTGGAGGACAGATAAGCTTTGATGTTTT CCCTCAAGGTTGGGATAAAACATATTGCCTGAAATACCTTGATGATTTCACTGAAATCCACTTCTTTGGTGACAAAACTTACAAGGTAGTCCACAGTTTA TTATGCAAAGATTTTAAACCTACTATGTTTGCCATCATATATTCTCTTCCCCTTGCATATATATGCTAGGTCATTTTGTTCTCTATTTAATCTGCATTTA TTAGCAGCCCCTTTTTCTTTAAATCTGAAAATTTTTCTTTTGTATCAAAATGCTTCAAGTTCCTTCTTGTAGAAGTTGTATCAAGCAAGCTGTGGGCAAT TTGATTCAGTTCTAGATTTTGACATGAAATGAATTGATTTTATATATCTATTGAAAGGACTTATCTAATTATTGTAAAACAACTAGTGCAATCACATTCA TCCTCAAGACAGAAGTTACCTTCCATCTTCATTACATGTTGTAGCTTTCTTTTCTCTTCTAGACTAGATTCAAACCTTTCACAGACATGGTAAAGACCAA AAGTTAATCTGTTTTGTATAACTTCTTTTATTAATTTTATCATTCGTTGAGTAGGGTGGAAATGATCATGAAATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_172311; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342180
| Blastp | Phosphomannomutase from Oryza sativa with 85.33% of identity |
|---|---|
| Blastx | Phosphomannomutase from Oryza sativa with 85.79% of identity |
| Eggnog | ,hydrolase(COG0561) |
| Kegg | Link to kegg annotations (4337437) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426453.1) |
| Pfam | Eukaryotic phosphomannomutase (PF03332.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |