| Id Trinity | TRINITY_DN49800_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_342140 |
| Sequence | AGCGAGGATACTCTCTCTCTATTGTGTGTGTTTGTGTCAATTATCGCGACCCACATCGAGGTTGTCATTGGGGGCTGGTCGGATTCATGAAGCAGCCAAG CTGCTTGATCGAATGCTTCTTCGGGGGTTCAGCGCTGATGCTCTAACTTATGGGTTCTTAATGCATGCGTTGTGCACCAATGGGCAAATTGATGAAGCAA GGGCCTTGCTAGATAAAATTCCCAATCCGAATACTGTGCTCTATAACACATTAATAAATGGCTATGTGGCTAGTGGGCGGTTTGATGAAGCTAAGGATCT TTTGTACAATAACATGGTAGTTACAGGCTATGAGCCAGATACCTTCACGTTTAACATACTGATCAGTGGACTTTGCAAGAAAGGGTTTTTGGTCTCTGCT CTTGAGTTCTTACATGAGATTGAAATGAAAGGATTTGAACCCAATGTGGTCACATACACCACATTGATAAATGGTTTCTGCAAGCAAGGTCGATTAGAGG ATGCAGCTGAAGTTGTGAATAGCATGTCAGCCAAGGGTCTCAGTTTAAATACTGTGGGGTACAATTGCTTGATTAGTGCTCTTTGCAAAGATGGGAGGAT TCAAGAAGCTTTGCATATGTTTGGTGAAATGTCAAGCAAAGGAAGTAAACCCGACATTTATACATTCAATTCCTTAATATATGGACTATGCAGGAATGGT GAGATGGAAGAGGCCTTGGGTTTGTATCAGGACATGTTCGTGGAGGGTGTTATTGCCAACACTGTAACATACAACACACTCATTCATGCATTTCTCAGGA GAGATTCAATCCAACAAGCGTTTAAGCTTGTTGATGAAATGCTATTCAGAGGGTGCCCTCTTGACAATATTACATATAATGGCCTTATCAAAGCTCTCTG TAAAACCGGGGCAGTAGAAAAAGGATTGGGCTTGTTTGAAGAAATGCTTGGGAAAGGGATTTTTCCTAATGTTAGCTCTTGCAATATTCTGATCAACGCC TTCTGCAGAGTTGGAAAAGTAAACGACGCTCTTCAATTTCTCCGGGATATGATTCATCGTGGTTTGACACCAGACATAGTCACTTATAACTGCCTGATCA ACGGTCTTTGCAAGATTGATCGTGTTCAAGAGGCTTTGAACCTTTTTAACAGGTTACAAGTTGAAGGAATCCATCCCGACGCAGTTACATACAACACACT GCTAAGTAGGCACTGCTATGAGGGTTTATCTGATGAGGCATGTTTACTTTTACATAAAGGTGTGGATAATGGTTTCATACCTAATGAAGTCACTTGGAAT ATATTGATATGTCATTTTGTGAAAGAAGGGGTCAAGGGGAGTAAAATATTCTTCTAGGGTTGTTATGGTGGAATAGAAAGCTGCTTTCCTTTGAAGCCAA AACATTCCTTTCAGGTCTCTTTATTTTGCTCCTTGACCCCATTTGATTTGTGTCTTGGCTATCAATTTACTATTAGCATGGGGAATATGACTGCAGAATT TGAATGATAAGTGAGTGGGGGCAACTAGTAATAGTGTTGATTCTTCAGAAAAAAACACCATCCTTCTCTGGATCTACCTTCTATACAACTAGAACTAGTT ATAACAACTTTGTAATATTAACATGTTCACTTTGAAATATTTGTTAAGCTTATGTGCAGCACTCTTCTCTTAAACATGTAAAGCAATAGGAAGAAGGGTC CTGGTTTAGAACATGGTTATGAAATTGAGATGCTAAATTAGCTCATCAATATTTTTCATCTGAGATCAAAGTCCATGTAGTCGATCCCACTTAGTAGGAT AAATGTTTGGTTGTTGTTGTATCAAGGTAATTATATCAGTAGACACTAAACAATGTGGACATATGTGTATATGTTTGGATTAAAAGATTCTAACTCAAAT TGTTCCATTTTTTGGAAACTATTCCATCTATTGGAAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_172311; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342140
| Blastp | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial from Arabidopsis with 53.41% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial from Arabidopsis with 53.41% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G64320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461313.1) |
| Pfam | Tetratricopeptide repeat (PF14559.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |