Ll_transcript_342174

• Id Trinity: TRINITY_DN49800_c1_g2_i22
• Name Transcript: Ll_transcript_342174
• Sequence: AATGAAGTTAATGAGAGTAAGATGAAGAATAAAATGTTAGAAAAATAGAATGAAGTGAATGAATGAGATTGTGATCTAACTGCTATGGCTGATCTTGTTT CTCTCCCATCAACTTTTGTGTTGTTATTCGCAATCTCACTCTACTTCGCTTCTTCTTCTCAATATCTTTTCTCTGTTAATGCTTCACTTACCCCAATCAA CTACAATCTCTATCATTCCAGTGGTAATTTGATGGAAGAGATTAGGGATTTGGTTCGTCGTCACCCGGCTAAACTCACTATGGAGACATTTAAAGCTGGA AACAAAGGCTATGGTGCCGAGCTTGCAGTGGTTACTTATTGCAACGAGAGGAAAAGAGAGAATGATGAGAGGTCAAAGTTTCGAATTCTTCTTAGTTTTG GGCAGCATGGAAGGGAGCTTATTACCACAGAACTCGCTTTAAGGATCTTGTCTATTCTAAGTGAAGAACAACATCTACCTAGCATGGATCTTGCTACCTT AAACAGTACACTTGACAAGCTTATCATAAAGGTGGTTCCAATGGAAAATTTGAATGGCCGCAAACTTGTTGAAGCTGGTGATCTTTGTGAGAGAAGAAAT GGCAGAGGAGTTGATCTCAATCGAAATTGGAGTGTAGATTGGGGCAAAAAGGAGAAGGATTATGATCCATATGAGGAGAATCCTGGATTTGCTCCATTTA GCGAGCCTGAAACTCAAATTATGCAGAAACTTGCCATGTCATTTGACCCACATATATGGGTCAATGTACACTCCGGAATGGAGGCTCTTTTTATGCCATA CGATCATAAAAATACAACGCCTGATGAATTGCCATTGCAACGGATGAAGTCTTTGCTTGAAGAAGTAAACCTTCTTCACTGTCAAAAGCATTGCATGATT GGATCTGGAGGCGGTTCTGTAGGGTTTAGTTGTTTTCCAGTGGGATATGTATGTTTTATTCTCCTGCTCATGTCCATTTCAGTGAATATCATGGAAAGAG GGGGAAATGACCATTGCAGCTTCCTAGGTGCATTTTTTCTGATTTGCAGACATTGTAATACATAGGGAATTTAACCATAGAGTAAAATAGGAAAGACCAT CTTGCTCAAAATACAGTCAACCTATAATCACTTAATTTATTGGTTTGCAAGCTGTACTCAAATGACACTCCATCAGTGTCTGGACATGTCCTTTTAGGGC CTCCAATATTCTAGTGCTCTTCGATAATTTGAGGTTGAAAGTTGTAACCCAGCATCAGTTTTTTAGATGCCAAACGTTTAAGAGTGAAAACTGTAAATTT CGAAAGTAAAAAAATACATGATATGCTTGAGTACCTCGAATTTGATGTAGTTGAATGTCTTTTTTTTTCCGTCTATATGCCATTCCTTCCTCAAGCTTAG AAGCTGCTTACCAGGTATTTTGCGCATGGGACAGCAACTGATTTCATGTATGATATGCTGAGGGTTCCCATGGCTTTCACCTTTGAGATTTATGGAGATG GAACAGCCTCATCTAAAGACTGTTTTAAAATGTTTAATCCCACTGACCCCTCTAGCTACAATGTATGTTCCCTAACTTCAAATTTTAAGATTTGGAACTT GTGATTTGGAATAATAGTGATTTGACTTAGACAAATTCGATCCATTCGATGAACATGAGATTTCTTAGTTCCAATCTGTGTTTCTATTCTGATTTGCTAA GATCAGAAATTAAGCCCTCTGATCTTCATTCAACAGTTAAGATTTACCAAAGTCACTGAATCCATATCCCAACATTTGACAGCAATGATTAACTTCATTC CTGTGGATTTATGAGACACTTTTCGTGTTCTCCCTTCACTATCAAATGGGTTTTTCTGAACATTTTATGGTATCATTTTCAGAGAGTTCTCAATGACTGG TCTGCAGCATTGTTTACAATTTTTAAATTGGGGCCACACCAGCTTGGTGAGATCCATTCAAA
• Tissue: pods
• Gene name: LI_gene_172312;
• Additional information: details;

Expression of Ll_transcript_342174

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.2
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342174

• Blastp: Carboxypeptidase A6 from Homo with 25.11% of identity
• Blastx: Carboxypeptidase A6 from Homo with 26.01% of identity
• Eggnog: metallocarboxypeptidase activity(COG2866)
• Kegg: Link to kegg annotations (57094)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020234667.1)
• Pfam: Zinc carboxypeptidase (PF00246.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;