| Id Trinity | TRINITY_DN49800_c1_g2_i27 |
|---|---|
| Name Transcript | Ll_transcript_342186 |
| Sequence | AATGAAGTTAATGAGAGTAAGATGAAGAATAAAATGTTAGAAAAATAGAATGAAGTGAATGAATGAGATTGTGATCTAACTGCTATGGCTGATCTTGTTT CTCTCCCATCAACTTTTGTGTTGTTATTCGCAATCTCACTCTACTTCGCTTCTTCTTCTCAATATCTTTTCTCTGTTAATGCTTCACTTACCCCAATCAA CTACAATCTCTATCATTCCAGTGGTAATTTGATGGAAGAGATTAGGGATTTGGTTCGTCGTCACCCGGCTAAACTCACTATGGAGACATTTAAAGCTGGA AACAAAGGCTATGGTGCCGAGCTTGCAGTGGTTACTTATTGCAACGAGAGGAAAAGAGAGAATGATGAGAGGTCAAAGTTTCGAATTCTTCTTATGATTC CTTGTCTTCCAGAGTTTTGGGCAGCATGGAAGGGAGCTTATTACCACAGAACTCGCTTTAAGGATCTTGTCTATTCTAAGTGAAGAACAACATCTACCTA GCATGGATCTTGCTACCTTAAACAGTACACTTGACAAGCTTATCATAAAGGTGGTTCCAATGGAAAATTTGAATGGCCGCAAACTTGTTGAAGCTGGTGA TCTTTGTGAGAGAAGAAATGGCAGAGGAGTTGATCTCAATCGAAATTGGAGTGTAGATTGGGGCAAAAAGGAGAAGGATTATGATCCATATGAGGAGAAT CCTGGATTTGCTCCATTTAGCGAGCCTGAAACTCAAATTATGCAGAAACTTGCCATGTCATTTGACCCACATATATGGGTCAATGTACACTCCGGAATGG AGGCTCTTTTTATGCCATACGATCATAAAAATACAACGCCTGATGAATTGCCATTGCAACGGATGAAGTCTTTGCTTGAAGAAGTAAACCTTCTTCACTG TCAAAAGCATTGCATGATTGGATCTGGAGGCGGTTCTGTAGGGTCAGTATATATAATTATTTGAATCTGACGTGGACAATAAAAAATTACATTGGGACTT ATGTTTGTGCTTTATATATGGTTCCGCAGGTTTAGTTGTTTTCCAGTGGGATATGTATGTTTTATTCTCCTGCTCATGTCCATTTCAGTGAATATCATGG AAAGAGGGGGAAATGACCATTGCAGCTTCCTAGGTGCATTTTTTCTGATTTGCAGACATTGTAATACATAGGGAATTTAACCATAGAGTAAAATAGGAAA GACCATCTTGCTCAAAATACAGTCAACCTATAATCACTTAATTTATTGGTTTGCAAGCTGTACTCAAATGACACTCCATCAGTGTCTGGACATGTCCTTT TAGGGCCTCCAATATTCTAGTGCTCTTCGATAATTTGAGGTTGAAAGTTGTAACCCAGCATCAGTTTTTTAGATGCCAAACGTTTAAGAGTGAAAACTGT AAATTTCGAAAGTAAAAAAATACATGATATGCTTGAGTACCTCGAATTTGATGTAGTTGAATGTCTTTTTTTTTCCGTCTATATGCCATTCCTTCCTCAA GCTTAGAAGCTGCTTACCAGGTATTTTGCGCATGGGACAGCAACTGATTTCATGTATGATATGCTGAGGGTTCCCATGGCTTTCACCTTTGAGATTTATG GAGATGGAACAGCCTCATCTAAAGACTGTTTTAAAATGTTTAATCCCACTGACCCCTCTAGCTACAATGTATGTTCCCTAACTTCAAATTTTAAGATTTG GAACTTGTGATTTGGAATAATAGTGATTTGACTTAGACAAATTCGATCCATTCGATGAACATGAGATTTCTTAGTTCCAATCTGTGTTTCTATTCTGATT TGCTAAGATCAGAAATTAAGCCCTCTGATCTTCATTCAACAGTTAAGATTTACCAAAGTCACTGAATCCATATCCCAACATTTGACAGCAATGATTAACT TCATTCCTGTGGATTTATGAGACACTTTTCGTGTTCTCCCTTCACTATCAAATGGGTTTTTCTGAACATTTTATGGTATCATTTTCAGAGAGTTCTCAAT GACTGGTCTGCAGCATTGTTTACAATTTTTAAATTGGGGCCACACCAGCTTGGTGAGATCCATTCAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172312; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342186
| Blastp | Metallocarboxypeptidase A-like protein TRV_02598 from Trichophyton with 28.26% of identity |
|---|---|
| Blastx | Metallocarboxypeptidase A-like protein TRV_02598 from Trichophyton with 27.75% of identity |
| Eggnog | metallocarboxypeptidase activity(COG2866) |
| Kegg | Link to kegg annotations (TRV_02598) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020234667.1) |
| Pfam | Zinc carboxypeptidase (PF00246.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |