Ll_transcript_342662

• Id Trinity: TRINITY_DN49801_c0_g1_i2
• Name Transcript: Ll_transcript_342662
• Sequence: TTGTAACCATCCTCCTATAGAGAGCAAGTAGGGTTTTTACTCACTCTCTTCTGCCTCCTAGGGTTTCCCCATTCTCACAGTTTCTCACAAACTCCACCGC CACCCATGACGACGGTGGTCCCTACCTCCGATGAAGACCCCGCCCTCTCCGTCTTTCGATTCGTCTCCGATCTCTCCTGGGCCGATGCTGGTCCCGAGGT TGCTGAGCCACAAGTTACTAGACTGTGCTTGGAAGCTGAAGAATTCATTGCTCTGGGAAAGTGGTTAGAGCTAGCGAATTTGATGGTTCCTTCTGCTGAA GTTATTTTCTCAAAGGTGCCTGAAAAAGATGTAGAATCCATCTTCACTATTATCTGCAATCTTGTTACAAAGACTGAGAATCCAGATGAAGCGCTGGAGA TTGTGAAAGTTATTATACCAGAAAAACCAATTCAGCCACAAATTGAAAAGCCTGCAGTGCGCTTGAAGATTTGGATGAATCTGTACAATCTTTTGGAGAC TCCACACTCCCGGTTTTATGTCTACAAGAAGGCATTGGAATTAGCAGTTGTTGGGAAAGTCACTGAATACATTTTACCTTCATTCAAGAAGATTGATAGC TTCTTGAAAGACTGGAAAATCGGTATACCTGATCAGCGAGAGCTCTTTCTCACCATCTCTAATATTTTGAAAGACAATAAAAGCACGACAAAGGATTCTT TTAAGTTCCTGACCAATTATTTGGCCACTTTTAACGGAGAGGATGCTCATGTTTTGGAGAAAGCCAAGGAGGGGGCTGTTCGTGCGATTGTGGAATTTGT GAAGGCGCTTGACTTATTTCAGTGTGATTTACTAGACTTGCCGGCTGTTGGGCAACTGGAGAAGGATGCCGAGTATTCCTCGTTGTACCAACTTCTCAAG ATTTTTCTTACTCAGAGGCTGGATGTATACTTGGCCTTTCAATCTGCAAATTCCACATTGCTGAAAAGCTATGGCCTTGTGCATGAAGAATGTGTCGCCA AAATGAGGCTGTTGTCTTTGGTGGATCTTAGCTCTGATGGATCTGCCCAAATTCCATATGAACTTATTAAGGACACACTACAGATCACTGATGACGAGGT GGAACTATGGGTGGTTAAAGCAATCACTGCCAAGTTGATTGTCGGTAAGATAGACCAGATGAACCAAGTTGTAATTGTTAGTCATCATACTGATCGTGTG TTCAGTCAGCACCAATGGCAAACACTTAGAACAAAGCTAGTGACGTGGAGGGGAAATATTGCAAATGTTATCAGTACTATTCAGGCTAACAAGATACCTG AAGATGGGTCCCAGGCAGCCCAAGGTTTGGTTGTTCGCTGAACACTTTCTTGGATAATATATTTGAAGTCCCTAGCTGCTTTTATTTTAATCAACTTCCA ATTTCTCAATCTTAAATCGTACAAAGAGATTTTTGTAATCTGTTTCTGTTACACAGTACTTTCATTTATTTTAGTTGCAAGGCTACTCTAATTGTATTTT GCCAACTTTGACGAAGATGCCATTTTTTATTGAAGTTTCCTAAGCTTGTTTGGATGGTTTGTCTTGCCCATTATTTATTTATTGAGAATAAAGTATCTCC TGACTAAGGTGATAAGTTATCTCCTTCGCCATTGAAATTATG
• Tissue: pods
• Gene name: LI_gene_172318;
• Additional information: details;

Expression of Ll_transcript_342662

FPKM

• PAB: 21.3
• PNAB: 92.9
• PS1: 63.7
• PS2: 58.6
• PS3: 58.5
• PW1: 64.7
• PW2: 45.2
• PW3: 29.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342662

• Blastp: Eukaryotic translation initiation factor 3 subunit M from Dictyostelium with 36.18% of identity
• Blastx: Eukaryotic translation initiation factor 3 subunit M from Dictyostelium with 35.9% of identity
• Eggnog: formation of translation preinitiation complex(ENOG410XNP7)
• Kegg: Link to kegg annotations (DDB_G0287005)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442748.1)
• Pfam: PCI domain (PF01399.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;