Ll_transcript_342028

• Id Trinity: TRINITY_DN49807_c1_g1_i1
• Name Transcript: Ll_transcript_342028
• Sequence: AAAGAGTCTATATATAATTATATATTGATTACCACTTCTCCACATATTCAGAACAACTCTAACTCCTATTGTTACTGCTACTATCATAAACACGACAGTA GCAACAGGAGGGGTTGCTCACGGATCTATGGCCAACATGAAGAGCCTAACCATCCAAGTCATCACCGGTAGGTGGTTCGTGGTGTTTGTCTCCTTCCTAA TCATGGCAGCCGCCGGAGCCACCTACATGTTTGGCCTATACTCCTCAGACATAAAAGAAACACTTGGCTATGACCAAACCACTCTCAACCTCCTTAGTTT CTTCAAGGACTTAGGTGGCAACTTTGGTGTTCTCTCTGGCCTAATCAATGAGATCACACCACCCTGGGTGGTGCTATCCATGGGTTCAGTTCTCAACTTC TTTGGTTACTTTATGATATGGCTAGCAGTGACCAAAAAAATAAAAAAACCTCAACTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAAT CTTTTGCAAACACTGGGTCCCTTGTCACGTGTGTGAAGAATTTCCCACAAAGCCGTGGGGTTGTGTTGGGTATTCTCAAAGGCTATGTTGGTCTTAGTGG AGCTATTATTACACAACTATACTTTGCTTTTTATTACGATGACTCTAAGGCTTTGATTTTGCTCATAGCTTGGCTTCCAGCTGCTATATCTTTCGTTTTT CTTCGAACCATTCGATACATGAAGCCGGTTAAGCAGCCTAATGAGCTCAATGTTTTCTACAAGTTCTTGTATATTTCACTTGGTCTTGCTGGGTTTCTAC TTGTTATGATTATAGTGCAGAAACAAGTGTCTTTCACACAAAGTGAGTATGGTGTGAGTGCTGCTGTGGTGCTTTTCTTGCTCTTCCTCCCTCTTGCTGT TGTTTATGGTGAACAATTTAAGATCCAGCAGAGCCAAAAGCTTGCATTTTTTGACCCATCACCGGTGGAAATAGCTACTGAAGCTGAAAATAGTAACTCT AACTCTACCTCTCTTTCAACAGCAAGAGTTCCCACAGAAGCTGAAGAAACAAAATGGTGGGAAAATGTGTTTAGTCCACCAGATAGAGGTGAGGACTATA CAATACTTCAAGCACTTTTCAGCATAGACATGATAATATTATTCATTGCTACCACTTGTGGTGTTGGTGGTACTTTAACAGCAATTGATAACTTGGGTCA AATTGGAACCTCACTGGGATACCCAAAGAAAAGCATAAGCACTTTTGTGTCTTTAGTGAGCATTTGGAATTACCTAGGACGTGTGTTTTCTGGTTTTGTT TCAGAACATTGTCTAACAAAGTATAAGTTCCCTAGAACTCTCATGCTCACTTTGACTCTCCTCTTCTCATGTGTTGGTCATCTTTTGATAGCATTTGATG TAACTAACGGTCTCTATGCAGCTTCAGTTATTATTGGGTTTTGTTTTGGTGCACAATGGCCTTTAGTTTTTGCCGTAATATCGGAGTTATTTGGACTTAA GTATTATGCTACTTTGTACAACTTTGGAGGAGTGGCTAGTCCAATTGGGCTATATATTCTTAATGTGAGAGTCACTGGCCATTTGTATGACAAAGAAGCT AATAGGCAATTGATAGCATCAGGGGTCTTAAGAAAAGTAGGTCAAGAATTGAATTGTGTTGGTGCAAGTTGCTTCAAGTTGTCCTTCATTATTATCACTA CAGCGACTTTCATTGGTGCTATTATTTCCTTGGTTTTGGTTGCTAGGACAATTAAGTTTTATAAAAGTGACCTTTACCAGCGGTACAAGGAGGAGCCTGT AGGACAAGAGGTGGTGGTCCAGACAGGCCGCCAGGGAGAACAAGAACCCAAAGGTGAGATGTGATTTATGAAAGATAAAGTTATCATTTCATTATATCTA AACGATAAAAATATCATATGATTATATCTAAGTATCATCTTGTTATTTTTTTAGTTTAGGCTTGTTTAAAAATATTAATAACAAATATATACAAAATGAT TGTAACTTTTTCTATAGAAATTTATGGTTATAGTTATTTTTCCAACTAGTATATTAGACTTTTGGAGTAAACCAGGTCGCACTCAACTATACATTTTGCT ATAAAGGTTGTGCAATACGTGGTGTAAGCAGGTTCTATAACATCAATTGGTTGAATCAAAGAAATTGTCAACAAAAATAGCAACTAACAAATCCATCCTT ATCAATGATAATTATGTAGTAATGGGTTCAATGTATAGG
• Tissue: pods
• Gene name: LI_gene_172376;
• Additional information: details;

Expression of Ll_transcript_342028

FPKM

• PAB: 22.6
• PNAB: 3.8
• PS1: 2.2
• PS2: 2.1
• PS3: 3.7
• PW1: 6.6
• PW2: 13.6
• PW3: 12.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342028

• Blastp: Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 24.46% of identity
• Blastx: Protein NUCLEAR FUSION DEFECTIVE 4 from Arabidopsis with 32.65% of identity
• Eggnog: Nodulin-like(ENOG41105RT)
• Kegg: Link to kegg annotations (AT1G31470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441373.1)
• Pfam: Nodulin-like (PF06813.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;