| Id Trinity | TRINITY_DN49808_c0_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_341338 |
| Sequence | AGATTTCTACAATTGGAATAGGATTAAGGTTAGGTACTGTGATGGGGCATCATTTACCGGTGATGTGGAAGCAGTAAATCCTGTAACAAAGTTGCACTTC AGAGGAGCAAGGGTTTTTACTGCTGTCATTGAGGATTTGCTCGCAAAAGGAATGAAAAATGCTGGAAACGCTATTATATCTGGATGTTCAGCTGGAGGAT TGACTTCAATATTGCATTGTGATCGCTTTCGAGCTCTATTACCTACACGAGCTAATGTTAAATGCATCTCGGACGCTGGTTACTTTATCAATGCAAGGGA CGTCTCTGGAACACGACACATCGAACAGTTCTTCAGCCAAATTGTTGCAACACATGGCTCTGCTAGGAATTTGCCTCCATCTTGCACTTCAAGACTCAGC CCAGGGCTGTGCTTTTTCCCGCAATATTTTGTATCGCAAATCGCTACACCAATCTTCCTTATAAATGCGGCTTACGACTCATGGCAGATTAAGAATATTT TGGCACCGGGTGTCGCTGATCCTCGTGGCCATTGGCATAGCTGCAAGCTTGATATAAACAACTGCTCCTCTAATCAACTTGATACAATGCAAGGTAATTA CTGTGATCTTATTAAACTCACTGAAATTCGCCGAATCTTAGACTCAAGGAATTTTGATAAGTCTCTAATCACCCTTGCAATGCTGTCTATATGCTATAAC TTGTCAAGCCTATCTCAAATTTGTTTATAGACCTTAACAATATTGGCATAATAAGAAGAACAGTCTCCTAAAGGATCTAGTATTTTCATATCAATCTTTA TAGCCCTTAAAAATACTGGCAGCACTTCACTTTTATGCATGACTTAATTTTCAGGCTTCAGGACAGAATTCTTAAGAGCATTGACTGTGCTAGGGAACTC TCAATCTAAAGGAATGTTTATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAAGAGACATGGTTTAGAAGCGACTCTCCACTGTTGGCTAAGACA GTAAGAGACTGCATTATTTATATCTTTTAGAAAACATTCCTAAAGATTAAGGGTCCCTTTGTTTAGATTTTTGAAAAATTATGCTCAATAAACATTTTTT GGCAGAATTTTGTGTGACTACTGAATTTCAGCTTTTTGCCCCTCAACTAAACATTTTTAGTAAAAACTCTACCAAACAAGCATATGAACACAAGAAGTTG TGTTTTTCATAAAAAAACACTTTTTTCAAGAAAAAACCTTAAACAAGTGGACTCTACAACAATAGTTGTTCAAAACTTCAAATATATAACATGTCATGAG CATTTTGTGTGGCTTTTGTTTTACAATTCTTGTCTTTACATAATAACATTACATTTACATTCTGCAGACAATTGCAAAGGCAGTAGCAAACTGGTTTTAT GATAGAAGGCTTTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCAAGTTGCCATAACCGCATTTTCGATCCACGGCACGACAACCCGGGAATATAGA TTCATTTCATGAAAATTTATACATTGATTTTTATCATTCTTATAAACCATACTTATTGGTTGAATTGCTTATTGGTTAAGAAAAGTAAAATAAAGGAAAT TTGATTTATGATTTATCAAGCTACAAAATAAGGACATGCTGCTATTGCACTGAACATGTGTATTGGGCACCCTCCATCATTGTTTAATGTCACAACTATA GTCTTAATAAGAATGTAATATATCATATGTTGTTGCAACTTGATGTATCTGTTATTTGGTTAAGTGGATTTATTATATGTTGTCTGAATGTTAGAAAAAT GTGGCACTACTTAGAAATGTAAGATGCATCAACAAGAAGGGCCAAATTTCCAAAATTAGCAAACAGGGTGAGCTAAGTTGCAATATTATGCAATGGAGCA TTACTTTCAAGTATACTAAATGTTAATTAATGTCATAAAGCAAGAAGTTGAGAATTTCATGCTTTTCATTAAGACACTAAAAACTTCGGTTCCTTAACTA TCTTTAAGGTGTGATTAGAATGAGCAACAAAAAGTCAAAGACAACTAGACAAAGGGGAAGGGTAAAAAAGAAAGTGATGTCACGTGGAGGGGGAAAAGCA AGTTCCATCAATGCTATCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172381; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341338
| Blastp | Pectin acetylesterase 8 from Arabidopsis with 69.54% of identity |
|---|---|
| Blastx | Pectin acetylesterase 8 from Arabidopsis with 69.54% of identity |
| Eggnog | pectinacetylesterase(ENOG410XQKD) |
| Kegg | Link to kegg annotations (AT4G19420) |
| CantataDB | Link to cantataDB annotations (CNT0000075) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422153.1) |
| Pfam | Pectinacetylesterase (PF03283.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |