Ll_transcript_341942

• Id Trinity: TRINITY_DN49811_c0_g3_i3
• Name Transcript: Ll_transcript_341942
• Sequence: ATCAATAAAACTCAAGTCAACATCTTCCACAGTTTTGGATTCTGAATCCAATAATCGAACAAAACCAGCTTTTGATACTACAATATTTTCGGAACACACC CCTCTTTGCTTTGTTTTTAGACTTTTTTCTTATTATCATTCTTCAACCAAGGAACAAAACAAGGGTCTTGTCAAGTTACACACACACATATATATATATA TACAAAGTAGACAAGTCACAGAACATAGTACAACATGTTTTCATCTTGAAACTTGGATCTATATGTATAATTTTGTCTACTATTCTGTAAAAACTTGAAG ATGGAGATGGTTCCAGAGAACATGAAGAAGCAACTTTCTTTGGTTGTGAGGAGCATACAGTGGATATATGCAATCTTTTGGTCTGGTTCAGCTACCAATC CTGGTGTCTTGAGCTGGGGGGAAGGATATTACAATGGAGACATTAAGACTAGAAAAGCAAATCAAGGAGTAGAACATAATTCTGATGAAATAGGCTTGCA GAGAAGTGAGCAATTGAGAGAGCTATTCAGGTCTTTCAAAACTACAGAAGCAACAAAAAAGCCTTCAGCAACACTGTCCCCTGAAGATCTCACTGATACT GAGTGGTATTATTTGGTTTGCATGTCCCTTGTATTCAACATTGGTCAAGGGTAAATATTATCTCATTTTCACTTTTTTGTATGTTTTGGACAATATATTT GTCTTATCTTAACAAGATCGATGAAAGTATGATCGAATCATTGCTCGTAAAGCTTAGACAACCCTCACCCTATGAGTTAGCTTTTGTGGTTAAGTTGGGT CTAGCTATTCTAATATGGTATAAGAGCCTGACAATCACGATGGGCCACCCGTAGATGTCCAATCCTGCAACGTTCAAGCTCTAGATGTCCGGTCGTGGGC ATGAGGGGTATGTCTAGTCTTGGTGGCGTGAGATAGATAAGTTCCACATCTGATAGAATATGTTCGAGCCGTTGCTTATAAGGCCTAGACAATGTTCACT CTATAAGCTAGTTTTTGGTTTGAGTTAGGTCAAACCATTCAATATCTCTTCATTTCTCATGTTGGGGATAGTGCAGTCTGATGTGTGTCTTAATCTTAGT TATCCTTAGATCCATGTATGCTTCTACTTTGCAGGTTACCTGGAAGAACTCTAGCCAATGACCGGCCTATTTGGTTGTGCAATGCACATTCTACCGATTG TATACTTTTTAGTCGCTCTCTGCTCGCTAAGGTCGGATTCTGTTTCTTGATTTGGCTTGTTCTTACTTCTGGTCTTGATTAATATGTTGTTTTATTTTAC ACTCTAGCTATATACCATGCTTAAATTGGCATGAAGTGTGGAATATATGTCTAATTTTTTGGTTTTTGTTCCTCAAACACACTTGGAATAACTGTCTTAT CTCATGCTCAGAGTGCATCTATTCAGACAGTTGTGTGCTTTCCATTTATGGAAGGGGTTATTGAGCTAGGTACAACTGATCTTGTGCAAGAAGATCTTAG TCTTATTCAACAGATCAGAACTTCCTTCTTGACTATTCTGGAAGTCGATGTTCCTAAAAAGGCAGGAGCTACATTGAACACGGGAAACGAGGAAGATGTT GCATGCACGGCATTTGATCAAAATGGTTATAATGTTAAATCAACTGCAGAAGTAGGAAATGAAGTAATCAACACAACCTCTCCGAATGTTTCGGATATGT TACAACCTAATCAACCAGCAGATGAAACATTGATGGTTGAAACCTGGCAAGTTATGGATGAAGAATTAAGCAATTGTGTCCATAATTCGATGAATTCTAG TGACTGTATATCCCAAACTTTTGTTAGTCCTGAGATGATTGCTTCTGTTGCCAATGGCGAAAATACAAATGATCATTATGACCAAGACCTTCAAAAGTTC AATAACCCGAAAATGACCTTAGTGGATCCTCAAAGCGACCATTGGCATTATCAGAGTGTTCTTTCAACCCTTCTAAAAAGCTCAGACCAGTTAACTATGG GAACACGTTTCCAAAATTTTCATCAGGAATCGAGCTTTGTCAGTTGGAAGAAAGGAGGGCCAATCGATTGCCGAAGGCCAAGAGCAGGAAAACCACAAAG TTTGTTGAAGAAAGTATTGTTTGAAGTTCCTCGGATGCACTTGGAGGGGTTGCTTGAGTCTCAAGAAGAGAATGACTACAAAGATGGAATGAGACCGGAG GTAGATGAAAACGGCACGAACCATGTTTTGTCCGAAAGAAGGAGAAGAGCAAAACTAAACGAAAGGTTTTTAACTCTTAGATCAATGGTCCCTTCAATTA GTAAGGATGACAAGGTTTCAATACTTGATGATGCAATAGAATACCTTAGAAAACTTGAGAAAAGGATAACAGAATTAGAAGCTCAAAGGGATATAATAGA TATAGAGGCTAGAACTAAAAGATCACCTCAAGATATGGTGGAGAGGACTTCTGATAATTATTTCAATAAAAGTGCTACTAATGTCAAGAAGCCAATGAGT AAAAAGAGGAAGGTTTGCGATATTGACGCGGCGCGCGTCGAGATTAATTCGGATGCTTTTAGAGGTAGCTCTACTAATGATGTCAGTGTTAGTGTGAGTG GCAATGAAGTTGTAATAGAAATGAAGAGCCTTTGTAGACAAGGAAGGGTGCTAGAAATTATAGAAGCAGTTAGCTCTCTCAATTTAGATCTTAATTCAGT TCAGTCAACAGAAGCTGATGGAAATCTTTATCTGAAAATTAAATCTAAGTTCAAAGGACCAACTATTGCATCAGCAAAAAAGATGAAACAAACACTCCAA AGAGTGGCTCACAAGTGTTGATTCTTCTGTATTTCCACCAAAAACCAAGGGGATGTTCAGTTTAGTTCCTGACACTGCTATGTAACATAGAGAATTCATT TCAAATAATGGAGTCACAACTCACAAGTGGAAGTTGCTGCAGAATTTTGTGAAAGACTTCCAATGAAAGGGTATATAGTTTTTGTTTTGCTTTCTATAAC TTCTTGCTTTTGTTACTTGTAAAATGGACTTCTGTCAAATCATTTTTAATTTGTAAATGGGAAAATAAGCTTAGTTGAGTAGATTTTGTGTAATGCTACT AGCAACTATAGCCAAGATAACTAGACCAATGGCTATATTAACAAGGATCCTACATTTGTCACCAATAAAAGAAGTAGGGATATAGCG
• Tissue: pods
• Gene name: LI_gene_172412;
• Additional information: details;

Expression of Ll_transcript_341942

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0.3
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341942

• Blastp: Transcription factor EGL1 from Arabidopsis with 37.13% of identity
• Blastx: Transcription factor EGL1 from Arabidopsis with 37.82% of identity
• Eggnog: Transcription factor(ENOG410Z2WK)
• Kegg: Link to kegg annotations (AT1G63650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422571.1)
• Pfam: Helix-loop-helix DNA-binding domain (PF00010.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;