Ll_transcript_341949

• Id Trinity: TRINITY_DN49811_c0_g3_i6
• Name Transcript: Ll_transcript_341949
• Sequence: CAAAATAAATATAGTAAGTACTAGGCAGTAGTTGAACTAATCCTAGTTTCATACCAGAATATTTTTGGAACAAGACATTCTTAAATCATGGAAACAAAAC AAGGGGGTTGTCAAGTTAATGAATTTTTGTCTTCATGAGACTTGGATCTATATGAATAGTTGTGACCATTGGCCTTCCAAAACAAGGATATGGAAATGGT TCCAGAAAATATGAAGAGACAACTTTCTTTGGCTGTGAGGAGCATACAGTGGATCTATGCAATATTCTGGTCTGGTTCAGATACCAACCCCAGGGTCTTG ATCTGGAGAGAAGGATATTACAATGGAGACATTAAGACTAGGAAAACCAATCAAGGATTAGAACTTAATTCTGACCAAATTGGGTTGCAGAGGAGTGAGC AACTAAGAGAGCTTTTCAGATCACTCAAAACTACAGAAGCAACTAAAAAGCCTTCAGCAACACTTCCCCCTGAAGATCTCACTGATACTGAGTGGTTACC TGGAAGAACTCTAGCCAATGACCGGCCTATTTGGTTGTGCAATGCACATTCTACCGATTGTATACTTTTTAGTCGCTCTCTGCTCGCTAAGAGTGCATCT ATTCAGACAGTTGTGTGCTTTCCATTTATGGAAGGGGTTATTGAGCTAGGTACAACTGATCTTGTGCAAGAAGATCTTAGTCTTATTCAACAGATCAGAA CTTCCTTCTTGACTATTCTGGAAGTCGATGTTCCTAAAAAGGCAGGAGCTACATTGAACACGGGAAACGAGGAAGATGTTGCATGCACGGCATTTGATCA AAATGGTTATAATGTTAAATCAACTGCAGAAGTAGGAAATGAAGTAATCAACACAACCTCTCCGAATGTTTCGGATATGTTACAACCTAATCAACCAGCA GATGAAACATTGATGGTTGAAACCTGGCAAGTTATGGATGAAGAATTAAGCAATTGTGTCCATAATTCGATGAATTCTAGTGACTGTATATCCCAAACTT TTGTTAGTCCTGAGATGATTGCTTCTGTTGCCAATGGCGAAAATACAAATGATCATTATGACCAAGACCTTCAAAAGTTCAATAACCCGAAAATGACCTT AGTGGATCCTCAAAGCGACCATTGGCATTATCAGAGTGTTCTTTCAACCCTTCTAAAAAGCTCAGACCAGTTAACTATGGGAACACGTTTCCAAAATTTT CATCAGGAATCGAGCTTTGTCAGTTGGAAGAAAGGAGGGCCAATCGATTGCCGAAGGCCAAGAGCAGGAAAACCACAAAGTTTGTTGAAGAAAGTATTGT TTGAAGTTCCTCGGATGCACTTGGAGGGGTTGCTTGAGTCTCAAGAAGAGAATGACTACAAAGATGGAATGAGACCGGAGGTAGATGAAAACGGCACGAA CCATGTTTTGTCCGAAAGAAGGAGAAGAGCAAAACTAAACGAAAGGTTTTTAACTCTTAGATCAATGGTCCCTTCAATTAGTAAGGATGACAAGGTTTCA ATACTTGATGATGCAATAGAATACCTTAGAAAACTTGAGAAAAGGATAACAGAATTAGAAGCTCAAAGGGATATAATAGATATAGAGGCTAGAACTAAAA GATCACCTCAAGATATGGTGGAGAGGACTTCTGATAATTATTTCAATAAAAGTGCTACTAATGTCAAGAAGCCAATGAGTAAAAAGAGGAAGGTTTGCGA TATTGACGCGGCGCGCGTCGAGATTAATTCGGATGCTTTTAGAGGTAGCTCTACTAATGATGTCAGTGTTAGTGTGAGTGGCAATGAAGTTGTAATAGAA ATGAAGAGCCTTTGTAGACAAGGAAGGGTGCTAGAAATTATAGAAGCAGTTAGCTCTCTCAATTTAGATCTTAATTCAGTTCAGTCAACAGAAGCTGATG GAAATCTTTATCTGAAAATTAAATCTAAGTTCAAAGGACCAACTATTGCATCAGCAAAAAAGATGAAACAAACACTCCAAAGAGTGGCTCACAAGTGTTG ATTCTTCTGTATTTCCACCAAAAACCAAGGGGATGTTCAGTTTAGTTCCTGACACTGCTATGTAACATAGAGAATTCATTTCAAATAATGGAGTCACAAC TCACAAGTGGAAGTTGCTGCAGAATTTTGTGAAAGACTTCCAATGAAAGGGTATATAGTTTTTGTTTTGCTTTCTATAACTTCTTGCTTTTGTTACTTGT AAAATGGACTTCTGTCAAATCATTTTTAATTTGTAAATGGGAAAATAAGCTTAGTTGAGTAGATTTTGTGTAATGCTACTAGCAACTATAGCCAAGATAA CTAGACCAATGGCTATATTAACAAGGATCCTACATTTGTCACCAATAAAAGAAGTAGGGATATAGCG
• Tissue: pods
• Gene name: LI_gene_172412;
• Additional information: details;

Expression of Ll_transcript_341949

FPKM

• PAB: 0.5
• PNAB: 1.1
• PS1: 0
• PS2: 0.2
• PS3: 0
• PW1: 0.7
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341949

• Blastp: Transcription factor EGL1 from Arabidopsis with 41.81% of identity
• Blastx: Transcription factor EGL1 from Arabidopsis with 41.81% of identity
• Eggnog: Transcription factor(ENOG410Z2WK)
• Kegg: Link to kegg annotations (AT1G63650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422571.1)
• Pfam: bHLH-MYC and R2R3-MYB transcription factors N-terminal (PF14215.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;