| Id Trinity | TRINITY_DN49811_c0_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_341951 |
| Sequence | ATCAATAAAACTCAAGTCAACATCTTCCACAGTTTTGGATTCTGAATCCAATAATCGAACAAAACCAGCTTTTGATACTACAATATTTTCGGAACACACC CCTCTTTGCTTTGTTTTTAGACTTTTTTCTTATTATCATTCTTCAACCAAGGAACAAAACAAGGGTCTTGTCAAGTTACACACACACATATATATATATA TACAAAGTAGACAAGTCACAGAACATAGTACAACATGTTTTCATCTTGAAACTTGGATCTATATGTATAATTTTGTCTACTATTCTGTAAAAACTTGAAG ATGGAGATGGTTCCAGAGAACATGAAGAAGCAACTTTCTTTGGTTGTGAGGAGCATACAGTGGATATATGCAATCTTTTGGTCTGGTTCAGCTACCAATC CTGGTGTCTTGAGCTGGGGGGAAGGATATTACAATGGAGACATTAAGACTAGAAAAGCAAATCAAGGAGTAGAACATAATTCTGATGAAATAGGCTTGCA GAGAAGTGAGCAATTGAGAGAGCTATTCAGGTCTTTCAAAACTACAGAAGCAACAAAAAAGCCTTCAGCAACACTGTCCCCTGAAGATCTCACTGATACT GAGTGGTATTATTTGGTTTGCATGTCCTTTGTATTCAACAATGGAGAAGGGTTACCAGGAAGAACTCTAGCAAGTGATCAACCTATTTGGTTGTGCAATG CTCATTCTGCTGATTGTATACTTTTCCGGCGCTCTCTTCTGGCTAAGGGTGCATCCATTCAGACAGTGGTGTGCTTTCCATTTATGGACGGGGTTATCGA GATAGGTACAACTGATCTTGTAAGATGCTCCCCTTGATTTAACTTCAACATTACTTTTCTGTCATTCCCTTGCTCATAAACTGTGTTGCTTGCATTGTAT TTATTTTTGTGAAGGTGCCAGAAGATCTTAGTCTCATTCAACGGATCAGAACTTCGTTCTTGAATATTTTCGAGTTCAGTGTTCCTAAAAAGGATGGAGC TACATTGAACATGAGAAATGAGGAAGAAGTTGCTGATAAAAATGCTTATAATGCAAAATCAACTGCAGAAGTAGGAAATGAAGCAATTAGCATAACCTCT CCTAAGAGTTCAGATGCATTACAAGGGAATCAGCCAGCAGCTGAAACATTGATAGTGGAAATGGTTAATGGTGGTATCTCCCGAGTACAAAGCTGGCAAG TTTCGGATGACGAATTAAGCAACTGCATCCATAACGCAATGAATTCTAGTGACTGTATATCTCAAACTTTTGCTAGTCCTGAGAAGATTGCTTCTGTTGC CAATGGTGAAAATTGTAATGATCATTGTGCAAGAGACCTTCAAAAGTTCAATAACTCAGAAATGACCTTAGTGGATCCTCAAAGAGATGATTGGCATTAT CAGAGTGTTCTTTCAACCCTTCTAAAAAGCTCAGACCAGTTAACTATGGGAACACATTTCCAAAATTTTCATCAGGTATCAAGCTTTGTCAGTTGGAAGA AAGGCGGGCCAATCGATTGCCAAAGGCCAAGAGCACGAAACACGAAAAACTTACTGAAGAAGGTATTGTTTGAAGTTCCTCGGATGCACTTGGAGGGGTT GCTTGAGTCTCAAGAAGAGAATGACTATAAAGAGGGAATGAGACCAGAGGTAGATGGAAATGGCACGAACCATGTTTTGTCGGAAAGAAGGAGAAGAGCG AAGCTAAATGAAAGGTTTTTAACCCTTAGATCAATGGTCCCTTCAACTAGTAAGGATGACAAAGTTTCAATACTTGATGATGCAATAGAATACCTCAGAA AGCTTGAGAAAAGGTTAAGAGAGTTGGAAGCTCAAAGGGAGATAATAGATATAGAGGCTAGAACTAAAAGATCACCTCAAGATATGGTGGAGAGGACTTC CGATAATTATTTTAACAAAACTGATAATGGCAAGAAACCGGTTGTTAAAAAGAGGAAGGTTTGTGATATTGATGCGGCTCGAGTAGAGATCAATTCAGAT GCTCTTAATGGTAGTTCTACTAATGATGTTACTGTCACTGTGAGTAGCAATGAAGTTGTAATAGAGTTGAAGTGTCCTTCAAGAGAAGGAAGGGTGCTCA AAATAATGGAAGCAATTAACTCTCTCAATTTAGATTTTAATTCAGTTCAGTCAACAGAAGCTGATGGAAATCTTCATGTGACCATTAAATCTAAGCTAAA AGGACCAACTATTGTATCAGCAAAAAAGATCAAACAAACACTCCAAAGAGTGGCTTCAAAGTGTTGAATCTCTTGTATTTCACAAGTGCAAGTTGCTGCA TAATTTTTTGAAGATTTCCAATGAAAGGGTATATATAGTTTTTTGTGCATTCTATAACTTCTTGCTATTCTAACATGTACTTCTGTCCAAGCAGTTGAAA ATGGAAAGATAAGCTTAGTTGAGCTCATTTTGTGTAATGCTATTAGCAATTATAGCCTGACAGAATTTGAACAATGACTATATGTTAATAGCTAAACCTG CATTATTGATTATGATATAGACACAAACAAAAGCAGTAGGGATAATGCATCTTCCATGTGATATTATAAAAGAACTTACCAAGATGATTTTCTTATATTA TTTTACTGAAGCAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172412; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341951
| Blastp | Transcription factor GLABRA 3 from Arabidopsis with 41.86% of identity |
|---|---|
| Blastx | Transcription factor EGL1 from Arabidopsis with 62.98% of identity |
| Eggnog | Transcription factor(ENOG410Z2WK) |
| Kegg | Link to kegg annotations (AT5G41315) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446579.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |