Ll_transcript_341197

• Id Trinity: TRINITY_DN49816_c3_g2_i1
• Name Transcript: Ll_transcript_341197
• Sequence: AGTGGGGTTTCTTCCAGGTTGTGAATCATGGTGTTAGCCATGAGTTGATGAAGAGTGCTAAGGAGTTATGGCGTGAGTTTTTTAACCAACCACTTGAGGA GAAAGAGGCTTATGCTAATTCTCCTTCCACTTATGAGGGTTATGGTAGTCGCTTGGGTGTGAAAAAAGGTGCAATTTTGGATTGGAGTGACTACTTTTTT CTCCATTACATGCCTCTTTCTCTTAGGAACCAAGCTAAGTGGCCTTCAATTCCGCAATCTCTTAGGAAAGTGATTGGTGAATATAGTGAGGAAGTGATTA AGCTAGGAGGAAGGATCCTAAAGATAATGTCAAAAAATCTTGGCCTAAAAGAAGATGACCTTATAAAAGCATTTGGTGGAGAAAATGAAGTTGGTGGTTG CTTAAGGGTCAATTTTTATCCAAAGTGCCCACAACCTGACCTTACTTTAGGACTATCCTCTCACTCAGACCCTGGTGGAATGACAATTATTCTCCCTGAT GATTTTGTTTCTGGACTTCAAGTATATAGAGGAAATGAATGGGTCACTGTTAAGCCTGTCCCTAATGCTTTCATCATCAACATTGGTGACCAAATTCAGG TGATGAGCAATGCAATATACAAGAGTGTAGAACACAGGGTGATTGTGAACTCAAACGAAG
• Tissue: pods
• Gene name: LI_gene_172436;
• Additional information: details;

Expression of Ll_transcript_341197

FPKM

• PAB: 26.9
• PNAB: 16.7
• PS1: 46.4
• PS2: 8.1
• PS3: 6.9
• PW1: 104.2
• PW2: 55.4
• PW3: 28.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341197

• Blastp: Probable 2-oxoglutarate-dependent dioxygenase At5g05600 from Arabidopsis with 68.04% of identity
• Blastx: Probable 2-oxoglutarate-dependent dioxygenase At5g05600 from Arabidopsis with 68.04% of identity
• Eggnog: 2OGFe(II) oxygenase(COG3491)
• Kegg: Link to kegg annotations (AT5G05600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413119.1)
• Pfam: non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;