Ll_transcript_341200

• Id Trinity: TRINITY_DN49816_c3_g2_i3
• Name Transcript: Ll_transcript_341200
• Sequence: TTATACGGTTGTATATCTATAAATAGAGTTAGGATCTTTTCTATTAATGGAGAGGCAAGTGCATCAAAAATCAAAGAAAAATGCAACTTTGAATAACATA TTTATCCTTTCAATTACCATAAAGTTATATTATTGCCATTAAAAACAAAGGTAAAAATATGGATGAGTAACATCATTGTAAATTTGAGTTTATTACATCA ATTTTTGAACACGTTTGGTACTGCTTGTTTTTCTCTCTATTTTCCATTTTATACATATATTTCATAGGAGAGATACTCATTTTAAGTTATACCGGTTACA TTCAATCTCATACATTCATTTTCTTAGATTTAACGAACCAAATGGGTGATTGAAATAAATGATGAGAGAGAGAATATAAAACTTAAATGATTTTAAAATT TCACTCATTTGGTCCGTTAGATCTAAGAAAATGAATGGATAAGATTGAGTGTAACCAGTATAACTTAAAATGAATGTAAATTGATCCCTCCTCATTTCAG ACACAATTAATATATTATCTATTATTTATACACACTATCAGTTAATACATTTTTTTCTCATAAATTAAATAGACATCATGAAACTGTATCCGATAAATTT ATTTTTAGGTATATATGTGTTGGCTAAAAGAAGAATGTAGATATTTTTCTGTTCCGTGTGCTATTTTCTGTTGTTGTTAAATTGTTATTTTCTGATTTTG TCATGTTTGGTTAGATGTACAAGTAGGTATCTTTATTTATTTAATTAATATTTTGTAACAAATTTATGGGCTACCAACTAATTAAGGTTATATAATGGGG GTGGGGAGAGGATTATAATGTATAATATCTATATAATGTCAGTGTAAATATTTATATCTTGATATATCATTTATCATTTATTATAATATTTTTTAAAGAA TCAATAATGATTAAATATAAATAAATGATACAATAATAGTATATAAAACTCATGTTTTATCAATATATTATTATATGTATAAATAAAAGTTAGGTTTTGA AAAGTTTGGACATGTCACATTGGAATGTGCTGGACGAAACCGTGTTAGACATTGGTGAATCTTTAAATTATTAATTTGAGGTAAGAGAAAGACTTATTGA ACACGTGTAAATTATGACACTTGTTGAACACTTCTTTCAAGTGGAAACACGTTATGTTTCTACACCAATATTACACCAACATGTAAAACGTGGACAGAGA TCTTTGTCACATAGTCTATCCCCAATTTCTATCCCTGACCAATCAGCTTTGAATAACTAAAATAGAAATATAATATTTTGTCTTTAAAAAAATTATTTTT ATTTATGTGACAATTTTCAATTAGTGAGAACAGGGAATTATGACAGGTTTCGGGACATATAATCCACTCCTTAAAACGTGGTGATATATATCTACGGCAA AGCCAGCTTTTAGCAAATAAGAAGAAAAAACAAATAATGTTATCTTTTCACATAAAAACATATACATGTTCTACCTTTATTCCAATTTAGTGAAAGAAAG AGAAGGTGGAGGAAAAAGTTTTATTTAAATTTTCATTTTAGAAGTCACACATGTAAGGTTGGTATATGAGTTTTGGATATAGGAATATCATAATTGTTAA TTGTTATATGTAAAAAATAAACAAAAACTGTATAATTGAGGGGAATAAAATAAAAATAGCTCTTGATAAAATAAATTATATACAAATACAAGGACATTTG CACCTCATTTTCATTATCTACATCATTCATGAGTTTTTTTGTTAATAAAATAATAAAAATACCCTTTTCACTAAAACACTTTATATGTTTCATCTATCAT AAAAAGTAAAAACAAATTGTGAACATTGTTAATTGTTTTTTTTATTTTTTCATATATGATTTCTTAATATATTTTTCCATCAACCACCTTGGCTGAAACT CACGGTTGATTTAGAAAAGGTTCTTTAGGGCTTAATCTCTTCATATGATCATTAGGAATATATATGTGTGGCTAAAGTCATTAGACATAACTTTTGTTTG ATGTTGGTTTCTATCCATAGAATATTTTATATTGATTGTGCAAATCTTATCACTTATTTTTATTAAGAAAAAGCATACCAAATTTTCATTATTAAATTTA TATCCCCCTAATGTTACTTTTTGTGATAATATAGGAAAGTGATTGGTGAATATAGTGAGGAAGTGATTAAGCTAGGAGGAAGGATCCTAAAGATAATGTC AAAAAATCTTGGCCTAAAAGAAGATGACCTTATAAAAGCATTTGGTGGAGAAAATGAAGTTGGTGGTTGCTTAAGGGTCAATTTTTATCCAAAGTGCCCA CAACCTGACCTTACTTTAGGACTATCCTCTCACTCAGACCCTGGTGGAATGACAATTATTCTCCCTGATGATTTTGTTTCTGGACTTCAAGTATATAGAG GAAATGAATGGGTCACTGTTAAGCCTGTCCCTAATGCTTTCATCATCAACATTGGTGACCAAATTCAGGTGATGAGCAATGCAATATACAAGAGTGTAGA ACACAGGGTGATTGTGAACTCAAACGAAG
• Tissue: pods
• Gene name: LI_gene_172436;
• Additional information: details;

Expression of Ll_transcript_341200

FPKM

• PAB: 0.5
• PNAB: 0.6
• PS1: 1.5
• PS2: 0.3
• PS3: 0
• PW1: 3
• PW2: 1.8
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341200

• Blastp: Probable 2-oxoglutarate-dependent dioxygenase At5g05600 from Arabidopsis with 71.17% of identity
• Blastx: Probable 2-oxoglutarate-dependent dioxygenase At5g05600 from Arabidopsis with 68.94% of identity
• Eggnog: 2OGFe(II) oxygenase(COG3491)
• Kegg: Link to kegg annotations (AT5G05600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413119.1)
• Pfam: 2OG-Fe(II) oxygenase superfamily (PF03171.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;