Id Trinity | TRINITY_DN49817_c0_g2_i5 |
---|---|
Name Transcript | Ll_transcript_341263 |
Sequence | AACAACATGTACCAAAACCACCGTCGATACCTAAACAGCTATATTAAAACACAAAACCGCACCTGGTATCTTCCAATACTTTCTTTTTTCTCCATTTTCA CCTCCACCCTGTTTCTTTCACCATTTCTTATTCATTTTTCAATCGCATATTTATTTTTTATCATTTATCTACCAATAAGATATTAATCTAATACTATCTC ACTACATCTCAAAGACGACAAAAATATTAAGAATTTAATTTGTCTTAACGATATTTTTTAGGAGAGACAACACTTAATTATTTCACAAATAAGTTCTGTT TGGTTGTAATGATTTACCGCTTTCCAGAGGCACACACAGTATCATTACACCGCTTTCCTTTCCAAAAGGCACACACAGGATTCTTTCCTCATTATTACAC AAACAAAGCCTTATTATAAATAAACCCTCTTTTCTACACTCTTCTCATTCAATTTCACATAAAACCACTTAATCTCTCAATCAATTTTTCTCTATCATTC CATAAACCATAAACCTTTTAACACCAACCAAAAATGGACACAACTATATTCACTGCAAACGACGTCGTTTCTTGTAATGGATCAAAAAAATACACTACTT CTGATTCTAACCCCATCCAGGGTTCTGTATCCACTTCGGTGATCTCTTCGTCCGAGGCCACATTAGGCCGCCACCTGGCTCGTCGCCTCGTCCAGGTAGG GATAACGGATGTGTTCTCCGTTCCCGGGGACTTTAACCTGACGCTCCTCGACCACTTGATTGCTGAGCCGGGGCTCAACCTCATCGGCTGCTGTAACGAG CTGAATGCTGGTTATGCAGCCGATGGGTATGCGAGGTCGAGGGGCGTCGGTGCTTGTGTTGTTACTTTCACTGTGGGTGGGCTTAGTATTCTCAACGCTA TTGCTGGAGCTTACAGTGAGAATTTGCCATTGATTTGTATTGTCGGTGGACCAAATTCTAATGATTATGGAACTAATAGGATTTTGCATCATACTATTGG GTTACCTGATTTTAGCCAGGAATTGAGGTGCTTTCAGACTGTTACTTGTTTTCAGGTACCAATCATTTCTCAAAAAAATTGAATTTTTATTTGTTTTTTT AATTCACTGATATGATTGTTTCTTTGTGACTTTGAAATTTTGGTACAAGTTTTTTTGTCATGATATGATCCAAGATGTTGACAGATCATGTTTCTTAGCT TTACCATAATTAAGAGTATTTATCACATTTTGGGTAAGGAACTAATCGCTTCCGGGGTGCATGGCTACCCCTCCCGAGAAGTGTCGTACCTAGGAATCGA AATATTGATTCATTGACTTTTTCGTCTACATTAGAATCTAGATGGACCTTATAGTTAGACCTTACACCAGTACACCAACCACCATCAATAAAATTTTACC AATTGAGCTAACTCTTTCATACAAAACAGCTATTTTTTTCCTCATTAGTTTAGGTCATCCAAATGGAGTAAAATTTAATAATATAGTTAGAATCACAATC ACTTTTAGATAAAAATGTGATCAATTTGTGAAAGTAAGATTGTGTCAACAGATGTTGTGGAAGGGTGAGAGGAATGAATCTACATGAAGAGTCAAGATTA GAAGTTACTTAAAAGGTCACTCAGCCATAGTAGAGTATTTTATATAATGCTGTGGTGAATAACTTGGAAGATGCTCATGAGTTGATAGACACAGCAATCT CAACTGCATTGAAGGAAAGCAAGCCTGTCTACATAAGCATTGGCTGTAACTTGCCTGGACTCCCTCACCCTACTTTCAGTCGCGATCCGGTTCCTTTTGT ATTGAATCCCAGACTGAGTAACCAGATGGGGTTGGAAGCAGCAGTTGAGGCAGCAGCCGAATTTCTCAACAAGGCAGTGAAACCAGTACTAGTTGGTGGT CCTAAACTGAGGGTGGCTAATGCCAATGATGCCTTTGTTGAACTAGCAGATGCAAGTGGTTATGCATATGCTGTGATGCCATCAGCTAAAGGGCAGGTTC CGGAGCACCATCCGCATTTCATCGGAACTTATTGGGGTGCTGTGAGTACTGCATTCTGTGCTGAGATTGTGGAGTCTGCTGATGCATACTTGTTTGCCGG TCCCATTTTCAATGATTACAGCTCCGTGGGATACTCACTTCTTCTCAAGAAAGAGAAGGCTATCATGGTTCAGCCTGACCGGGTTGTGATTGCAAATGGG CCTGCATTCGGGTGTGTGCTGATGAAGGATTTTCTCAAGGCACTCGCAAAGCGTCTTAAGCACAACAACACTGCATATGAAAATTACCACAGGATATTTG TCCCTGATGGACATCCTTTGGAGGCTGAACCCAAAGAACCTTTGAGGGTGAATGTTTTGTTCAAACATATACAAAATATGCTGTCTGCCGAAACCGCTGT TATTGCTGAGACTGGTGATTCATGGTTTAACTGCCAAAAGCTGAAATTGCCAAAGGGATGTGGGTAAGTTAGACCGAGTAGATGTGATTTGTGGTATTTA TATGTCATGTTATCTTTTCTTACTGTTTTGATGAAATTCTTTGAAACAGGTATGAGTTCCAAATGCAATATGGCTCAATTGGATGGTCTGTTGGTGCAAC TCTTGGTTATGCACAAGCTGTCCCCGAGAAGCGAGTGCTCGCATTCATCGGTGATGGAAGCTTTCAGGTTTGAACTCACAATAACTCCTTAAAAGATTAT TTCAATCAAAATGACTTTCCTTTACTGAACACATTTGTTTTAACTGCTTATGGTGTTTTAATCTTTTCAGGTGACTGCTCAAGATGTATCCACAATGCTG AGATGTGGGCAAAAGACAATAATCTTTCTGATAAATAATGGTGGATACACCATTGAGGTTGAAATCCATGATGGGCCATACAATGTGATTAAGAACTGGA ATTACACTGGCTTGATTGATGCAATCCACAATGGTGAAGGGAAATGCTGGACTACCAAGGTGTTTTTTTTGATATAATATTGCATTGGCTCAAGTATACT TTGGTTCCTGTATATAACACTGGCCTTCAACTTGGTCTCTATCATTTGAAAAAGTTCAATCCAGAGTTTTTATGTGTCACTTATTGTAGTTTTCATGTTA ACCATTGTCTAAGGACACTAGTTAAGGAGTCAAAGTAGTTATTATTGTATTGGAACCATAACTTCTAAATTTTGCAATGCATGCTTTCTATGTATGTTAA CATTTAGCCTGGACCAACAACAAGGTCTAAGACCTCATTAGATCATCAGGTCAAAGGTTTGATTTCCGGGAGTTATATTTGTTTTTAGTCAGTCATGCCC CTTAAAAGAGATTGTTCGTTACTCATAGGACGTGTCTATAGACGATAAGGACAAATGGTAATATTGTATTTGTATCCTTGATCTTTTCAGGTGTTTTGTG AAGAGGAGTTGATTGAAGCAATTAAGACAGCAACAGAAGCAAAGAAAGATAGCTTATGCTTCATAGAAGTGATTGTTCACAAAGATGATACAAGCAAAGA GCTTCTTGAATGGGGTTCAAGGGTTTCTGCTGCTAATAGCCGTCCTCCTAATCCTCAGTGAAACTTTACCACTTTTCTGGATTTGCCAATTATGTATTTC AGTTCTACCTTTTTATGATATCCTTGCATGGAATTTTCTTTTGTTACTGGCTTGTACATTTATGAAACTGAGTTTATGTGTTTAGAAAATATTATGTGTT AAATTGAAATTTTCTAGAAAATTGATTTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_172444; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341263
Blastp | Pyruvate decarboxylase 2 from Pisum with 91.55% of identity |
---|---|
Blastx | Pyruvate decarboxylase 2 from Nicotiana with 67.27% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413565.1) |
Pfam | Thiamine pyrophosphate enzyme, central domain (PF00205.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |