Ll_transcript_343468

• Id Trinity: TRINITY_DN49825_c3_g1_i3
• Name Transcript: Ll_transcript_343468
• Sequence: GAGTCAGCAGTCGAAATTCCAAGATCCACAGCATCCCGATTTCCGCTTTCTCTCTCCCAGATGGAGAAAGGCGAGAACTCTTCCACCACCGAACAAGACT CCTCCGACAACCACAAGCACCCAACGCGCCACCACCTAACTCTCCCTTCCGGCCTCACGCCTGACGAGTTCGAAACCCTCAAACCCGCCATCACAGAGCA CCACACCTACCTCTCTGGCCCCGGCCAATGCTCCACACTCCTCGCCCAGCGCATCCACGCGCCACCACAAACCGTCTGGTCCGCCGTCCGCCGCTTCGAC AAGCCCCACCTTTACAAACACTTTATCAAATCCTGTTCCGTTAAAGAACCCTTTAACATGAGCGTGGGGTGCACCAGGGAAGTTAACGTGATCTCAGGGT TACCGGCTGCTACAAGTACCGAACGCCTCGATATACTAGACGATGACCGACACGTCACGGGTTTCAGCATCATTGGAGGCGAACACCGACTCAGGAATTA CCGTTCCGTCACGTCGGTTCACGGGTTCGACCGTGATGGTGAGATCTGGACCGTTGTTCTCGAATCTTATATGGTGGACGTGCCTGAGGGTAATACTGAA GAAGACACGCGTCTCTTTGCTGATACAGTTGTCAAGCTCAATCTCCAGAAGCTAGCTTCTTTAACCGAAGGAATGAACCGCCACGGTAAGTAAGTCATAT TTAACCTGAACCGGTAACCTAAACCGCTAAACCCGGTTCAGACCCAAATTTACCAAAAAATGTATTGGAATTTGAAAGAAAGTTTCCCACGAACTCCGGA GAAAAACGAAATCCGGAGTTTTTTCTCTTCGTTCTCTTGGTTTTGGTGAGATTGTTATTTTTATTTTTTTTATAATTTTATTTCCTGTTTTGTTCATCCT CTTCCACGTTTTCGCAAACTTCCTCTGTTTTCGTTGTTACAAAAAACGTTAATACAATGACAGAGGGCATTTTGGTGAATGCAGCTTTTGTACAGAACAT GTTGACTTGTGGATGTTGATGGTTGTGTGGATATGCCATTTGCTTCTTATTTTATTCCTCTCCGTTTATATATTTGTGTTTGAGTAGTGCTATATTTTCC TATTAATCATTCTACTCAGACAAAAGTTGACATATGTCACTTATAATATGACACATGTCATCTTCTTGTGGATAGAAAGATGAATAGGAGAATATATCAT TTTCATTTGTATTTTGCTGCGCAATACTAATGTAGGAAGATGCTTCATTTTCTCGTTTGGTACTATTTTATCATAGTTGAAATTTCTATTTAATGTTATG CAGATTAATAGATACTCGTTACTTTTGAATGGTTTACATATATGAACATTAGAGAGAGAGAGAGAACAATTAATGGTAGGAACGGGCAGTCCCTTTTGGT GTGACAAAGTAAGTGAGATGCGTGATAGAATAAATTCTTTTTTGTCTTTTCCATTGAATTTGGACATCTTCCTCTTATCTCCTGACGCAACACTCAGACC TACGTTGGATAATGGATATTTACTGAATTGTACTTAGATAAGGTAATTAGTTTTGTTGTTTATTTAGATACAAATCAACACTTTGTTTACTGAATTGTAC TTATTATGCTAAAGAATGTTGAAAATCTACGTTTGATTGTTAATAATTTAAGTTAAAAATGACAAAATTTTAATTGAATATTGTAATAATTAATGGCATA AAATGATAAAAATTATAAGACTATAGAAAGTAGTTCTCTAATAAAATGGAGAGCTATATGACCACGCTATGAAAATCCAAGAAGGGTGGTTAAAATTATG AAAGCAAATACACATGTCAGTAATTACCAAACCTCTAGTTAGTGAAAAACAAAGAATTAACTAACTATACAAAGGTCAAAGATATGGAATAATAGACATC ATCCGTCTTCAAGATGAAGCCATGGCAAATAATACAATACTGTCAAGTAGAAATTATAGCTTTATCGATTACAAATCAGCATTCATAAATGTAATTGCTA TATCCAATGTCTAAACCAAATCAGCATTCGTTCTTATTTTAAGATTGTGAAGCACAGTTGATCGTTCTTATTTTGGTTTCTGTTGCATGCTTAAATTATG ACAATGGTCAACAAAAGGAGCGTGATTTTTCAGTGGGACACCATGAGATACAAAAATGTCGGACAATGGATCCCCGTTCTTACTCTTATGCCTTGGTGCT ACTTTCAAGTTTTAAATTCTTTCCACATTTCCCTTCTCCAGGCGAGTATTATTGGAATTCTTATATTATCATGTAATTGCTATATCCAATGTCTTCAATG CCTACATCTCCAATTTTTCACATTATTTTCACACTCCATCACAAGCATGATATGCCACATCTAAAGCCCTGATTCTTTCAATGAAAGTATATACGGTTCT CATCTACTTTTATAATGATGCGGCAATATCGAAGGAAGTAACCACTTCTTCAAAAAGCAAGTCATGGTTATGTTCTGCAACAAACACATTCCTCATGAAA TACTTCAATAGATCTTTTTAGTTTAATACGCATGAGAGCTTTGCACTCACATCTTGTTGATGACAATTTTTGGTGTCTGCTTTCATGCTAGATGACAAAA GTCACGTCTTTTAATTTCTCTTCTTTTAACACTTAGCTTTTTGTGAAATATGCACCTTCATCATGAGGACAAATTAGCTTTGATGGCAAACAAGAACAAA GAAGAATAAAGAAGAAGAGAACAAGAAGGAAACTTGAAAATGAATAAGAAACTTGTATATAGGAGAAGAGATGAAGAATTGAGTTAATTTTACAAGACTA AGCAACAAATGCTTATATACAAAGAAGAAGAAAAAGAACTTAGAAGCTAAAAACAGCAAAACAGAAAAATTGCCAAAAATGGAAACTGGACCTAAAACTA ACTTAAGAGATTTTCAAAAAATTACTATAAAAGGA
• Tissue: pods
• Gene name: LI_gene_172515;
• Additional information: details;

Expression of Ll_transcript_343468

FPKM

• PAB: 24
• PNAB: 1.1
• PS1: 0.5
• PS2: 0.3
• PS3: 0.2
• PW1: 1
• PW2: 1.2
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343468

• Blastp: Abscisic acid receptor PYR1 from Arabidopsis with 71.82% of identity
• Blastx: Abscisic acid receptor PYR1 from Arabidopsis with 71.82% of identity
• Eggnog: abscisic acid receptor(ENOG410YDHK)
• Kegg: Link to kegg annotations (AT4G17870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420169.1)
• Pfam: Polyketide cyclase / dehydrase and lipid transport (PF10604.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;