Ll_transcript_343072

• Id Trinity: TRINITY_DN49829_c0_g1_i1
• Name Transcript: Ll_transcript_343072
• Sequence: TACAAGTCAACTCCAATAATATAATATAATAATAAGAATTTACTAATAAGTTCCTGATTCAATGATATTTACATGCCCACTTCCTTAAAGTAAAGAAATC GAATTCAAATATGAGCAATGAAAAAATTACACAAATTTGATTTGACGACCCGCACCCGAAAATGCACGGGCTTTACAAACCAATAGAAAATATAAAGGGA AGGTATTTTGTTTGTTGGCTTTGCGTCGCTTAGCAGAGAAACGCAGGGAGGAAGAGGAAGCTGCTTCTTTCTTTTATTCATTCAAATAGGTTTTCATCTC TTATGCATATTTATCTCTGGAGTCTGCTAGTCAGAGAAGAATTTCTTTCACTCTGGCCGCTTTAACAAACTCAAACTATTCTCGCACCTCTAGGAGGGTG TGGGGTGATGATGAAGCGGGAGTGATTCTGCTTTGTGTTTTGCGAAGATCGGGATCATCAGACATATGGAGATTGTGCCGTGTTTCAGTTGGGTTGTCGC TTGATTATGGCTAAGGGTGCCTCTTGCTCTATCCCCAGAAGCTGTTTCTAGTTTGCAACTGAATCTCAGCAAATTTAGGGTCTTTTATAGGCTTCTGGAC TAATTGATGAGCAGTATTTATTGTCACTGATATTTTTTTTGCCTTAAAGATAGTTTCGTGCTTAGATGTAATGTAGCTCTCAAGTTTCAACATCATTGCA GCAATGTTTAGGTTTTCTTGTTTCCATGCTAATGTTCAAAATAACAAGCCAAAGAAAATAGCTCAACTTTCTACTGAAGGAATGGCAAAGGTTTCGAGAG ATGATTCCCCAAAGCAAGTGTCTAATGATCCCTCTATCACCACAAGTTCAAATTCATCTCCATCAAAAGCACAAGTACACAAGCAAATGAATGTCAATGG GAATCAAATGAGCAATCAGGATTCAGTTGAGCACATTTCTAGGCCTGAGGATCTGGATAGAAAATCTTCCTCTGAAAGTGAAGTGGAAGTTCACCAAACC AGGAATATTAAGAAAAGCCAGTCTCTGGCAAGTGGACTTTACCAAGAGGGCAGGCGATATACTGGGTACATAACTGAGGGTGATGCAGATCCAGAGTTTC CTTTAAATGATTCCAAAAGCCGCAATGAGTTGCCAGTTTCTGCGTGCAGAAAAGATCATGACATCATCCCCACTGACCAGTGTAATAAGAATCCGAACTC TGAGTTTCAACTCAGTTCAGGTTGTGCAAATGATGGCTCAATTTTTTCAATAGGAGATCTTGTACCCTCAGATCAGGATGCTCAAGAAATTTCTGATACT CCATTATCTGGTGAGTTTGCTGGTGATTCTGCTGAGCAAACTTCTGGTCCCAGTACACCATCTTTATTGAAGTCACATTCTTTACCCGATTTTGAAGATC CTGCGCTTTCTTCTGGAGCATACGCTTTTAAACACCCACCTTCAATTTCAAGATCTTCTAATGATCTTCATGCTTTAGGCAAGAGACAGAAAGAGGTATT CATCAATGAATCTGCTGATCAAATAAGGGGAGACCAAGAAAGAGAGAATGGCATAGGAAAAATGGAAGAGAGTCACATGGATAGTTACTTAAATGATGGC ATTGATTCTTATCTGACTTCCAATTCAGCAAAAGACTGGGTAATGCCAATTACAGATGATATGATAGATGTTGAAACCCTTCAAGGAGATTCTTCAATTG ATTGCTTTGGTGAATATCCTAACAAAGATTTTAAGGTTAAACGCATTGAGGATTGGGTAATAGGTCTCCAGCATTGTGGACCACCTCTAGAGATAATAAA TGAGTTGCCTGAATCTGTAGACCCTGAAGTTGATGTTAACACCAAAAATGGTGTAACTCCTGCCAAGGTAGACCATAAGGTCCTTCCTGGAATGGAAGCT GCTAAAATATATATATCTTCTCTGAGTGCTAATGCCACAGCGGCTCAGCTGGCAAATCATGGGTTGGTTGTGATACCCTTTTTAAGTGCTTTTGTGAGTT TGAAGGTGCTCAATTTGGCTGGAAATGCTATTGTGAGGATAACTGCTGGTGCTCTTCCTCGGGGACTTCATGTCTTGAATTTGTCAAAAAACAGTATCTC CACTATAGAGGGCTTACGTGAACTTACACGTCTTCGAGTCCTGGATCTCAGCTACAACCGTATACTAAGAATTGGACATGGTAAGGCAATTTCTGGATCA CATCTCAATTTTATTTTATTTTGTGGGAGTTATTTCATATGCAGGGTATCTATTGACATTCAAACATTGATTGCTGATATTCTCTCTATTTTTTGGTTAA CCTTTCCCTCATTTGGTAAGGCCTTGCATCTTGTTCATCTCTGAAGGAGCTGTACCTGGCTGGAAACAAGATCAGTGAAGTAGAGGGTCTGCACCGCCTC TTGAAACTAACTATCTTGGATCTCCGATTTAATAAAATTTCAACGACCAAATGTCTAGGCCAACTTGCAGCAAATTATAATTCATTGCAAGCTATCAGCT TGGAAGGGAACCCAGCCCAGAAAAATGTTGGAGATGAACAACTGAAGAAATGTCTGCAAGGCCTTCTTCCCCATCTTGTCTACTATAATCGTCAGCCTAT CAAAATGAGCACTTTAAAGGATGGTGCAGAACGTTCAGTTCGGTTAGGCATGAATTCCCACCAGTTTGATCGCAGCGGTAGATCAGATCGCAAGACCACT ACAAAGAAGACCAGTCGGCCATCGACCTCTTCCACTCATGCTCGCAGAAGTCAAGCAGTAGAGTCACCAAAACTATCCAAAAGCAAGCAAAACCAGTTGC CACCATCAACTAGAACAAGAGGATCAACCCCAAATCGCAATCATTTTGATGTTCCCAGTAAAGTGTTGAACATGACGTCAGAGCTCTCTATTCGCAAAAG TCGCAGTGAGGGAACTCTTGGAGCTTTGTGAGTGGTTATTCCATTGCCAATTGTTTCGATCACTGCCTTTGTTTCAGTATGCATCTATTTACATTGGTTT TTCATATTCGTGTCGGGTGTTTGTTTGAACCCTTTTATTGTTTGCCCTTAAATATGCTGCACTAGGTTTGGAAACATTGGTCTGTGGGCTGTATGCCCAA ATAATAAGCAGCAGCTTTCTGTAATGTACCATTTCTGTTTCAGTACAAGGAGTGCTATGGCAATGATTTCTTTTAAACACCTTTGTTTTTAACATTCTCT CTCCCTCCCATTTTTTAATCATAATTTCAAGAGAGTATAATGTGATAACTCAATAAGAG
• Tissue: pods
• Gene name: LI_gene_172556;
• Additional information: details;

Expression of Ll_transcript_343072

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 0.7
• PS2: 0.7
• PS3: 0.4
• PW1: 0.1
• PW2: 0.5
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343072

• Blastp: -
• Blastx: Protein phosphatase 1 regulatory subunit 7 from Bos with 37.38% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453753.1)
• Pfam: Leucine rich repeat (PF13855.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;