Ll_transcript_343073

• Id Trinity: TRINITY_DN49829_c0_g1_i2
• Name Transcript: Ll_transcript_343073
• Sequence: CAGCGGATCCTTTGTTGTTTGGTTGGTTTGCGTAGCATAGCAGGGCAACGCAGGAAAGAAGTGGAGGCTATACATCACTGTTCCCTTTTTCTTTATTTCA TTCATTCAAAGTGGTCTGAATCTCTTATGCATATTTGTCCCCGGATTCCACTAGACGGAAAAAAATTCTATCACTCTGGCCGCTTTTACAAATTCAAATT GTTCTCGCACCTCCAGAAGGGTGTGGGGCGATGATGAAGAGGGAGTGATTCTACTTTGTGTTTGTCAAAGATCGATATCATCAGACATATGGAGACTGTG TCGTGTTTCAGTTGGTCTGTCGCTTGATTATGGCTAAGGGAGCCTCTTGTTGTATCTCCATAAGCTATTTCTAATTTCAAACTAAATCTCCATAAATTTA GCGTCTTTGATTAGGCTTCTAGGAAAATTGATGAGCAATATGGATTGTTGTTGACATTATTTTTTATGCCATAAAGAAAGTTTCTTGATTAGAGATAGTG TAGTTCTCAAGTCTCAACATCATTGCAGCAATGTTTAGGTTTTCTAGTTTCCAAGCTCAACTCCAAAATAACAAGCAAAAGAAAACAGTACAGTCTTCTT CTGAAGTAATTGCAAAGGCTATGCAAGATGATTTGCGAACGCAAGTATATAATGATTTATCCTATATGAATAGAAGCTCAAATCCACATCCCTTGAAAGG ACAAGTACACAGACAAATGAATATCAATGGGAATCACATTAGCGATCGGGATTCAGTTGAGCACATTTGTAGGTCAGCGGATCTGGATAGCAAATTTTCA TTTGAAAGTCAGGTAGAAGTTCAACAAACCAGGCTTCTTAAAAAAAGTCATTCTGTTGCAAGTGGACTTCACCTAAAGGAAAGCCTATATACTAACCGCA TAACCGAGTATGATGCAGATTCGACTTTTTCTTTTAATGGTTCCAAAAGCCACAATGATTCGCCAGTTTCAGGTTGCGGACAAGATCATGACATTATCCC CATTGATCACTGTAAAAAGAATCAAAACCCTGAGTTTCAAGTTAGTTCAGCTCTTGCAAATGATGACTTAATTTTTTCAGTTGGAGATCTGACAGCTTCA AATAAGGATGCTCTTGAAATTTATGATACTCCATTATCTGCTGAATTTGCTAGTGACTCTGCCGAGCAAACTTCTGGTCCGAGTACCCCATCTTTAGTGA AGTCACATTCTTTATCCGATTTCATAGATCATGCACTCTCTTCTGGAGCATACGCTTTTAATCACCCACCTTCAATTTCAAGATCTTCTAATGATCTTCA TGCTTTATGTAAGAGGCAGAAAGATGTACTCATCAATGAGTCAGATCATCAAATAAAGGGAGATCAAGAAAGAGAGAATGATATAGGAAACATCAAAGAG AGTCATATGGATAATTTCCTCAATGCTGGTGTTGATTCTTATATGATTTCTGGTTCACCAAAAGACTGGGTGATGCCAACTATAGATGAGATTGGAGATA TTGAAACCCTTCGAAGAGATTCTTCAAGTGGTTGCTTTGGTGAATATCCTAACAAGGATTTTAAGGTTAAGCGCATTGAGGATTGGGTAGTAGGTCTCCA GCATTGTGGACCACCTCTAGAGATAATAAATGAGTTGCCTGAATTTGTAGGTCCTATCATTGATGTTAACACCAAAAATGGTGTGACCGCTGTCGAGGTG GACCATAAGGTCACTCTAGGAACGAAAGCTGGTGAAAAATATATATCTTATATGAGTGTTGATGCCACAACGGCCAACCTGACAAATCTTGGGTTGGTTG TGATACCCTCTTTAAGTGCTTTTGTGAGTTTGAAGGTTATCAATTTGTCTGGAAATGCTATCGCGAGGATAACTACTGGTTCTCTTCCTCGAGGACTTCA CGTTTTGAATTTGTCAAAAAACAATATCAGCACTATAGAGGGATTACGTGAACTAACACGCCTTCGCGCCATAGATCTCAGCTTCAACCGAATTGTAAGA ATTGGACATGGTCTTGCTTCATGTTCATCTCTGAAGGAGTTGTACCTGGCTGGAAACAAGATCAGTGAAGTAGAGGGTCTGCATCGCCTCTTGAAACTAA GTATCCTGGATCTTCGTTTTAACAAATTTTCAACAGCCAAATGTCTTGGCCAACTTGCAGCCAACTATAATTCATTGCAAGCTATCAACTTGGAAGGGAA CCCTGCTCAGAAAAATGTTGGAGACGAGCAACTAAAGAAATATCTGCAAGGCCTCCTCCCCCATCTTGTCTACTATAATCGACAGCCTACCAA
• Tissue: pods
• Gene name: LI_gene_172556;
• Additional information: details;

Expression of Ll_transcript_343073

FPKM

• PAB: 0.4
• PNAB: 0.6
• PS1: 0.2
• PS2: 0.7
• PS3: 0
• PW1: 0.7
• PW2: 0.9
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343073

• Blastp: Leucine-rich repeat and guanylate kinase domain-containing protein from Mus with 33.75% of identity
• Blastx: Leucine-rich repeat and guanylate kinase domain-containing protein from Mus with 33.75% of identity
• Eggnog: Essential for recycling GMP and indirectly, cGMP (By similarity)(COG0194)
• Kegg: Link to kegg annotations (74354)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453753.1)
• Pfam: Leucine rich repeat (PF13855.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;