Ll_transcript_343082

• Id Trinity: TRINITY_DN49829_c0_g1_i9
• Name Transcript: Ll_transcript_343082
• Sequence: TACAAGTCAACTCCAATAATATAATATAATAATAAGAATTTACTAATAAGTTCCTGATTCAATGATATTTACATGCCCACTTCCTTAAAGTAAAGAAATC GAATTCAAATATGAGCAATGAAAAAATTACACAAATTTGATTTGACGACCCGCACCCGAAAATGCACGGGCTTTACAAACCAATAGAAAATATAAAGGGA AGGTATTTTGTTTGTTGGCTTTGCGTCGCTTAGCAGAGAAACGCAGGGAGGAAGAGGAAGCTGCTTCTTTCTTTTATTCATTCAAATAGGTTTTCATCTC TTATGCATATTTATCTCTGGAGTCTGCTAGTCAGAGAAGAATTTCTTTCACTCTGGCCGCTTTAACAAACTCAAACTATTCTCGCACCTCTAGGAGGGTG TGGGGTGATGATGAAGCGGGAGTGATTCTGCTTTGTGTTTTGCGAAGATCGGGATCATCAGACATATGGAGATTGTGCCGTGTTTCAGTTGGGTTGTCGC TTGATTATGGCTAAGGGTGCCTCTTGCTCTATCCCCAGAAGCTGTTTCTAGTTTGCAACTGAATCTCAGCAAATTTAGGGTCTTTTATAGGCTTCTGGAC TAATTGATGAGCAGTATTTATTGTCACTGATATTTTTTTTGCCTTAAAGATAGTTTCGTGCTTAGATGTAATGTAGCTCTCAAGTTTCAACATCATTGCA GCAATGTTTAGGTTTTCTTGTTTCCATGCTAATGTTCAAAATAACAAGCCAAAGGTAAGCGGAAGATGCATTGCACTATAGATTTAGTGTAGCTTGGTTG ATTTCACATTACTTATTTTGACTTTGTTCTCAACTCTTGCAATCAGAAAATAGCTCAACTTTCTACTGAAGGAATGGCAAAGGTTTCGAGAGATGATTCC CCAAAGCAAGTGTCTAATGATCCCTCTATCACCACAAGTTCAAATTCATCTCCATCAAAAGCACAAGTACACAAGCAAATGAATGTCAATGGGAATCAAA TGAGCAATCAGGATTCAGTTGAGCACATTTCTAGGCCTGAGGATCTGGATAGAAAATCTTCCTCTGAAAGTGAAGTGGAAGTTCACCAAACCAGGAATAT TAAGAAAAGCCAGTCTCTGGCAAGTGGACTTTACCAAGAGGGCAGGCGATATACTGGGTACATAACTGAGGGTGATGCAGATCCAGAGTTTCCTTTAAAT GATTCCAAAAGCCGCAATGAGTTGCCAGTTTCTGCGTGCAGAAAAGATCATGACATCATCCCCACTGACCAGTGTAATAAGAATCCGAACTCTGAGTTTC AACTCAGTTCAGGTTGTGCAAATGATGGCTCAATTTTTTCAATAGGAGATCTTGTACCCTCAGATCAGGATGCTCAAGAAATTTCTGATACTCCATTATC TGGTGAGTTTGCTGGTGATTCTGCTGAGCAAACTTCTGGTCCCAGTACACCATCTTTATTGAAGTCACATTCTTTACCCGATTTTGAAGATCCTGCGCTT TCTTCTGGAGCATACGCTTTTAAACACCCACCTTCAATTTCAAGATCTTCTAATGATCTTCATGCTTTAGGCAAGAGACAGAAAGAGGTATTCATCAATG AATCTGCTGATCAAATAAGGGGAGACCAAGAAAGAGAGAATGGCATAGGAAAAATGGAAGAGAGTCACATGGATAGTTACTTAAATGATGGCATTGATTC TTATCTGACTTCCAATTCAGCAAAAGACTGGGTAATGCCAATTACAGATGATATGATAGATGTTGAAACCCTTCAAGGAGATTCTTCAATTGATTGCTTT GGTGAATATCCTAACAAAGATTTTAAGGTTAAACGCATTGAGGATTGGGTAATAGGTCTCCAGCATTGTGGACCACCTCTAGAGATAATAAATGAGTTGC CTGAATCTGTAGACCCTGAAGTTGATGTTAACACCAAAAATGGTGTAACTCCTGCCAAGGTAGACCATAAGGTCCTTCCTGGAATGGAAGCTGCTAAAAT ATATATATCTTCTCTGAGTGCTAATGCCACAGCGGCTCAGCTGGCAAATCATGGGTTGGTTGTGATACCCTTTTTAAGTGCTTTTGTGAGTTTGAAGGTG CTCAATTTGGCTGGAAATGCTATTGTGAGGATAACTGCTGGTGCTCTTCCTCGGGGACTTCATGTCTTGAATTTGTCAAAAAACAGTATCTCCACTATAG AGGGCTTACGTGAACTTACACGTCTTCGAGTCCTGGATCTCAGCTACAACCGTATACTAAGAATTGGACATGGCCTTGCATCTTGTTCATCTCTGAAGGA GCTGTACCTGGCTGGAAACAAGATCAGTGAAGTAGAGGGTCTGCACCGCCTCTTGAAACTAACTATCTTGGATCTCCGATTTAATAAAATTTCAACGACC AAATGTCTAGGCCAACTTGCAGCAAATTATAATTCATTGCAAGCTATCAGCTTGGAAGGGAACCCAGCCCAGAAAAATGTTGGAGATGAACAACTGAAGA AATGTCTGCAAGGCCTTCTTCCCCATCTTGTCTACTATAATCGTCAGCCTATCAAAATGAGCACTTTAAAGGATGGTGCAGAACGTTCAGTTCGGTTAGG CATGAATTCCCACCAGTTTGATCGCAGCGGTAGATCAGATCGCAAGACCACTACAAAGAAGACCAGTCGGCCATCGACCTCTTCCACTCATGCTCGCAGA AGTCAAGCAGTAGAGTCACCAAAACTATCCAAAAGCAAGCAAAACCAGTTGCCACCATCAACTAGAACAAGAGGATCAACCCCAAATCGCAATCATTTTG ATGTTCCCAGTAAAGTGTTGAACATGACGTCAGAGCTCTCTATTCGCAAAAGTCGCAGTGAGGGAACTCTTGGAGCTTTGTGAGTGGTTATTCCATTGCC AATTGTTTCGATCACTGCCTTTGTTTCAGTATGCATCTATTTACATTGGTTTTTCATATTCGTGTCGGGTGTTTGTTTGAACCCTTTTATTGTTTGCCCT TAAATATGCTGCACTAGGTTTGGAAACATTGGTCTGTGGGCTGTATGCCCAAATAATAAGCAGCAGCTTTCTGTAATGTACCATTTCTGTTTCAGTACAA GGAGTGCTATGGCAATGATTTCTTTTAAACACCTTTGTTTTTAACATTCTCTCTCCCTCCCATTTTTTAATCATAATTTCAAGAGAGTATAATGTGATAA CTCAATAAGAG
• Tissue: pods
• Gene name: LI_gene_172556;
• Additional information: details;

Expression of Ll_transcript_343082

FPKM

• PAB: 0.4
• PNAB: 3.3
• PS1: 4.6
• PS2: 3.6
• PS3: 4
• PW1: 1.5
• PW2: 1.7
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343082

• Blastp: Protein phosphatase 1 regulatory subunit pprA from Dictyostelium with 37.01% of identity
• Blastx: Protein phosphatase 1 regulatory subunit pprA from Dictyostelium with 32.76% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (DDB_G0284039)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453753.1)
• Pfam: Leucine rich repeat (PF13855.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;