Id Trinity | TRINITY_DN49831_c0_g1_i6 |
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Name Transcript | Ll_transcript_344105 |
Sequence | GTTTTGTTTTATTGATTCCAAATCAAAAACTGCTTTTATCTCTCTCTACAAGAAAAAAAAACCACCCTTTCTCTCTCTTACTTCATGTTTTGTTTTTTTT AATGTTAAACTTACCAAAACTCCTTTGAACTTATCTTACAAAAAGAGAAAAATAGTGAACAAAAAATAATAAAGCTTTGTACATTGAAACAAACTTCCAA GAAGAAACCAGAACACACACATGAGGGTGATTTTTTTGTCTAAAAAAGTTTCATGCTCATTGGGTTACTGTGTTTGAGAGAAGAATTCACAAATATCCTC CCTCTTTCTTTCTCTCTATGTAACATTTATTATTCTCTTTTGAAACTATGGCTGCTGCTGAGAGAGATATTTGGCTAAATGGTAATGATGAAGATGATCT TCTTGGTGTGAATGATCCTTCTATGTTCTATGCTGATTTTCCTCCTCTCCCTGATTTCCCATGCATGTCTTCATCTTCTTCTTCATCATCAACTCCAGCA CTTCCTGTTAAGACCACAAATTGCACCACCACCACCAGAACCACCTCGTCGTCTTCATCGTCTTCCGCCGCATCTTGGGCTGTTTTGAGATCAGATTTTG AGGAAAATCTTGAACAGAATAACTACAACTGTTGCATGCAGAATGAACATCAGCAACAGCTTGATCATAATCAGCATGATGTATATGATATAGGACCTGC AGCTTTATCCTCTAATGCTTCTATGGAGGTTTCTCAGCAGCACCATTACATTAACCACCAACAACAAAACCATGATCCTTGTCTTGATGGTACTGTTGGA AATTGCATGGATGAAGTGATGGATTTTGGATACATGGAGCTTTTTGAAGGGAACGAATTCTTTGACCCAGCATCTATTTTCCAAAGTGAAGAAAACCCTT TAGTGGAATTCACACAGGTTCAAACTGTGCCACAACAAGATGAACATCAACATGCAATGTTACCACATCATTATCAGGAATCTACACTACTACAACATCA AGGGATGACAAATGAAGAAGATAATGATCATCATAATCAGGCTCTTATGTGTGCCAATACTATCACCAACAATGATGTAGAGATTATCCATGTAGAAGCT GGTGCAACTGGTGCTGGTGTAGATGATGAAATGAGCAGTGTTTTCTTGGAGTGGCTCAAGTCTAACAAGGATAGTGTCTCTGCTAATGATTTGAGGAGTG TGAAGCTGAAAAGGGCAACAATAGAAAGTGCTGCAAAACGTTTAGGTGGAGGTAAAGAAGCCATGAAACAATTGTTGAAGCTTATTCTTGAGTGGGTTCA AACTAGTCATCTTCAGAATAAAAGGCGCAAGGAGAATAACGATTCAGATCTACTCACACAATTTCAGGATCCTATTCAAAGCCAAAACAGAAAAAACACT AGTTCCAATCTGCATGTTGCACCTGATCAATCAAACACTTGTTTCAACCAAACACCTTGGGTATCTGTGTCTCAACAAAATTATGCAACAACAACAGATC AAGCTCCTCTTATGACAACACCTCAACCATTTACACAACAAATGGTTGGTGGTTATGTGGGTGATTCTTACACAAATGGTGCTGCAGCTTCAAATAATCA TAACCCTTATCAACCTAGTGCTGAATATCAAATGCTGGAATCAGCACCTACATGGCCTCCCACTCAGTTCACTACTGTTACTAATTCTCAATATAATCAG TCATTTGGGGACAACAACCTTCACCCTCAAGTGCCGTCTGTGGCCGTGGCATTTGGTGGTGGCTATGGGAATCAATACCCTTATCAGTTTTTTCATCATG GTCCTGGTGGTGATGGGTTAATGAGATTAGGACCATCTGCGACAAGAGAGGCCAGGAAGAAGAGGATGGCAAGGCAGAGAAAGTTGTTGTCTCATCACAG GCACAACAATCAAAACCAGAATCAAGCCTTGGATCCACATGCAAGATTGGGAAGTGATAATTGCACCACTTTGTTAGCTCCGGCTCATGCAAATCAAGGC AATTGGGTGTATTGGCAGACTATGACTGGTGGGGCAGCTCCTATGGTACCAGTCGTTCCGGTTGAGCCGCCAGCAGTACAACAGGTGGTTGATCGGACCA CCATGCAAACCCAGAATACACAGAATTATCATCAAGGCCGAGTCTCATTGGATAAGCGACAGCAGGGTTGGAAACCTGAGAAGAACTTGAAGTTTCTTCT GCAAAAGGTGTTGAAGCAAAGTGATGTGGGAAGTTTGGGGAGAATTGTTTTGCCAAAAAAAGAAGCAGAAACCCATTTGCCAGAACTTGAAGCAAGAGAT GGAATTTCTATAACGATGGAAGATATTGGTACTTCTAGAGTTTGGAACATGCGTTATAGATACTGGCCAAACAACAAAAGCAGGATGTATTTGCTTGAGA ACACTGGGGACTTTGTGAGAGCTAATGAACTCCAAGAGGGAGATTTCATAGTGATATATTCAGATGTGAAGTGTGGCAAATTTATGATAAGAGGAGTGAA AGTGAGGCAACAAGGGATGAAATCAGAAACGAAGAAAGGAGGAAAGATGCATAAAAACCAACAGCATGGGAATAATAATGCTGCAACTACAGCTGTTGCT ATTAATAATGGCACTTCATCTTCACCTAAGCAGAAAAATGAAAAGCTAGCAAGATAATATACTAATAATATATAATACTATATTAGTACATTATATTAAT ATATAGTATATTTATATTTTTGGTAGAATAAGAGACACTGAAGACCATGCACGAGCTTTGAACAAACAAATGGATGGTTGAGATCTTCTGTGGTTGCTTT TGGATTGCAACCCTAGATTCTATCTTTATGAAAACTGCTTCACAGTGCCCACAGAATAGTAGTGTTAAGTAGTTTGAGACTTGAGCATGCTATATTCTAT GTTTTGGGTTATATATTTTTGCATTTATGCAATTGTTATGTGAAAAATGTTGTATGTGTTTAGTATTGTTCTATATTTAATCGCCATTTTAAACATAAGT TACATAGAAAATCACATTGTGGGTTGTATCATCC BLAST |
Tissue | pods |
Gene name | LI_gene_172572; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_344105
Blastp | B3 domain-containing transcription factor ABI3 from Arabidopsis with 43.9% of identity |
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Blastx | B3 domain-containing transcription factor ABI3 from Arabidopsis with 43.75% of identity |
Eggnog | Transcription factor(ENOG4111P6C) |
Kegg | Link to kegg annotations (AT3G24650) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019465044.1) |
Pfam | B3 DNA binding domain (PF02362.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |