Ll_transcript_343768

• Id Trinity: TRINITY_DN49835_c1_g3_i2
• Name Transcript: Ll_transcript_343768
• Sequence: CCCTTGTCTCTATATAATCCATTTCTCATTCTCGCGACTGGGGAAAAAAGCAAAGATATAGCCAAAGACACAGTACATATCAATCAAAGAACTCACTCAT CTTCACGAAACAATGGCGAATCAAAAAATAGACCCAAGAAGTGGTTTCAACACTTCCAACTCAACCTTCTACACCAAACGCAAACCACTCCCACTCCCTC AAAACCATTTCTTAGACGTAACCACCTTCATCTCCTCCCATTCCCACCGCGGCAACATCGCCTTCATCGACTCCGCCACCCGCCGCCACTTCACCTTCCC CCAACTCTGGCTCGCCGTCGACTCCGTCTCCTCCGCCCTCTCCTCCCTCGGAATCCGAAAAGGCGACGTCGTTCTCCTCCTCTCCCCTAACTCCATCTAC TTCCCCGTCGTTTGCCTCGCCGTCATGTCCCTCGGCGCCATCGTCACCACCACCAACCCTCTCAACACCGCAAACGAAATCGCCAAACAGATTAACGATT CTAAACCTGTTATCGCTTTCACTACCTCTCAACTCATCACTAAGATAACCGCTTCTTCACCGAACCTCCCAATTATTCTCATCGAAGAAAACGAAGAACT TCAACACAGTGGAGTTATTGACACGCTTCAAAATTTGATGAAGAAAGAACCGTCGGTTAACCGAGTTAAGGAGCGAGTTAACCAGGACGATACAGCAACA CTGTTATATTCTTCTGGAACAACTGGACCAAGCAAAGGCGTTGTTTCTTCGCACAGGAACTTAATCTCTATGGTGCAAATTGTTCAAAGTAGGTTCAAGA GTGATGATTTACAAACTTTCATATGCACTGTGCCAATGTTTCATATCTACGGTTTAATAGCATTTGCAACTGGAATTCTAGCTTTGGGTTCAACGGTTGT AGTGCTATCGAAATTCGATATGCATGAAATGCTTTTCTCGATTGAGAAGTTTCGCGCTACGTATCTTCCTCTTGTGCCGCCAATTTTGGTTGCGATGCTC AACAACGCGGAAGCGATTAGGGCGAAGTATGATCTGAGTTCTTTGCATACGGTGTTATCCGGTGGAGCACCGTTGAGTAAGGAAGTGACAGAAGGGTTTG TGGAGAAGTATCCTAACGTGGCGATTTTGCAAGGGTATGGGTTAACGGAATCTACTGGTGTTGGTGCTTCGACGGATTCGTTGGAAGAGAGTAGAAAGTA CGGCACGGCGGGGCTTTTGTCGCCGGCTACGGAGGGTAAGATTGTTGACCCTGAATCTGGGGAGGCGCTTCCGGTTAACCGGACCGGTGAGCTTTGGCTT AGGGGGCCCACTATCATGAAAGGTTATTTCAGTAATGCGGAAGCAACTGCATCAACCCTTGATTCACAGGGATGGTTAAAAACAGGGGATCTTTGCTACA TTGATGATGATGGATACATATTTATCGTTGATAGGTTGAAGGAGCTCATTAAATACAAGGGATATCAGGTTCCTCCAGCAGAACTAGAAGCCTTGTTGCA TACCCATCCTGCTATTTTAGATGCTGCTGTTATACCGTACCCAGATAGAGAAGCTGGACAGATTCCATTTGCATATGTAGTGAGGAAGGAAGGAAGTAAC TTATCAGAAAATGAAGTTATAGATTTTGTTGCAAAACAGGTGGCTCCTTACAAAAGAATTAGAAGAGTGGTGTTTACATCTTCTGTACCCAAAAACCCAT CTGGTAAAATTCTCAGGAAGGATCTCATTAAACTCGCGACGTCGAAACTCTGAAAGAGATAAAGTTCTTTTACATCAGTTTCTATTGGAGAGATGGTGAA TCCTGAACTAGTTTACGTTTTGCTGCAACTTTCTGGCTTGTTTATTTCTGTTAAGCTTGTATTCAATACAGTTTCAATCTGTTCTTTGTTTAATGGTCTC TATTTGTAAAAGGCAGCAAGTGCTACGTACTCTTAATTAATACTCTTAGGGAGAATAAATAATAATAATTCTGCCTTTCGATTTGAATGGATATAAGTTA TGCTCTTTTC
• Tissue: pods
• Gene name: LI_gene_172597;
• Additional information: details;

Expression of Ll_transcript_343768

FPKM

• PAB: 9.7
• PNAB: 6.3
• PS1: 4.9
• PS2: 2.4
• PS3: 4.9
• PW1: 14
• PW2: 8.3
• PW3: 6.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343768

• Blastp: 4-coumarate--CoA ligase-like 5 from Arabidopsis with 73.52% of identity
• Blastx: 4-coumarate--CoA ligase-like 5 from Arabidopsis with 73.33% of identity
• Eggnog: Amp-dependent synthetase and ligase(COG0318)
• Kegg: Link to kegg annotations (AT1G20510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414061.1)
• Pfam: AMP-binding enzyme (PF00501.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;