Ll_transcript_343770

• Id Trinity: TRINITY_DN49835_c1_g3_i4
• Name Transcript: Ll_transcript_343770
• Sequence: GTTGTCTCTTTATATCTATTAAAACCGTTTTCTATTCCTTTTACTTTTACTTTGTTTCTTCATCTCCTCCCATTCCCACCCGCCGCCACTTCACCTTCCC CCAACTCTGGCTCGCCGTCGACTCCGTCCCCTCCGCCCTCTCCTCCCTCGGAATCCGAAAAGGCGACGTCGTTCTCCTCCTCTCCCCTAACTCCATCTAC TTCCCCGTCATGTCCCTCGGCGCCATCGTCACCACCACCAACCCTCTCAACACCGCAAACGAAATCGCCAAACAGATTAACGATTCTAAACCTGTTATCG CTTTCACTACCTCTCAACTCATCACTAAGATAACCGCTTCTTCACCGAACCTCCCAATTATTCTCATCGAAGAAAACGAAGAACTTCAACACAGTGGAGT TATTGACACGCTTCAAAATTTGATGAAGAAAGAACCGTCGGTTAACCGAGTTAAGGAGCGAGTTAACCAGGACGATACAGCAACACTGTTATATTCTTCT GGAACAACTGGACCAAGCAAAGGCGTTGTTTCTTCGCACAGGAACTTAATCTCTATGGTGCAAATTGTTCAAAGTAGGTTCAAGAGTGATGATTTACAAA CTTTCATATGCACTGTGCCAATGTTTCATATCTACGGTTTAATAGCATTTGCAACTGGAATTCTAGCTTTGGGTTCAACGGTTGTAGTGCTATCGAAATT CGATATGCATGAAATGCTTTTCTCGATTGAGAAGTTTCGCGCTACGTATCTTCCTCTTGTGCCGCCAATTTTGGTTGCGATGCTCAACAACGCGGAAGCG ATTAGGGCGAAGTATGATCTGAGTTCTTTGCATACGGTGTTATCCGGTGGAGCACCGTTGAGTAAGGAAGTGACAGAAGGGTTTGTGGAGAAGTATCCTA ACGTGGCGATTTTGCAAGGGTATGGGTTAACGGAATCTACTGGTGTTGGTGCTTCGACGGATTCGTTGGAAGAGAGTAGAAAGTACGGCACGGCGGGGCT TTTGTCGCCGGCTACGGAGGGTAAGATTGTTGACCCTGAATCTGGGGAGGCGCTTCCGGTTAACCGGACCGGTGAGCTTTGGCTTAGGGGGCCCACTATC ATGAAAGGTTATTTCAGTAATGCGGAAGCAACTGCATCAACCCTTGATTCACAGGGATGGTTAAAAACAGGGGATCTTTGCTACATTGATGATGATGGAT ACATATTTATCGTTGATAGGTTGAAGGAGCTCATTAAATACAAGGGATATCAGGTTCCTCCAGCAGAACTAGAAGCCTTGTTGCATACCCATCCTGCTAT TTTAGATGCTGCTGTTATACCGTAAGACTTCAATACATCAGAAACTTTAGAAGACAAATAAATAAATTTGTGATTTCAATTTAGTATATATATAGAAGGG GAATAGTACCATTCCTGACTCTTGAGTTCTTCTCATGTCTTGTATATCAGGTACCCAGATAGTGAAGCTGGACAGGTTCCAATGGGATATATAGTGAGGA AGACCGGAAGTAGCTTATCAGAAAAAGAAGTTATGGATTTTGTTGCAAAACAGGTTAGTTTGGACTCTGAAGTATTACTCTGAGACCACATCTTCTGTCT CACAACATTGTGTCACTCCATGTACCACGAGTAGCGATTGGTCAGAAAAATGATTAACAATTAAATTTATAACTTAAATATATTATTTTCAACCAATCAC AGCTAATGGCACACATAGTGGTACACAATATGGGACAGAAGATGTGCTCCCAATCTTAATAGCTACTTATTTTGTTTTTGTTTCTTAGTCTCCATTCCTA CGTTCTAGCACATTTTCAGTAATGTGTTTGGTGTGAGATGAGCCGGTTTGGGAATATTGGTCGGGTTATATTTTTTAATCAAAACCGACTTTAGATTCCA ATGCTAATCCAAACCTCAAATATTTTTAATCTACCGATTCAAACCATTAGATTTTTATAGAATTGATGGCTAAGACAATGAATATGTATTTCAAACTTAA TTACAATGTATATTATTTTATACAATGACTTCTCAGTATTACTTATTATTGTATTACAAATATATAATTTGGGTCAAAGAAATCACATTACTCTCTACAG AGTTGAATAGACACCTACAAATATATGAATGAGTGGCCATGTGATGAGTCGGACTCACTCATGTTTATTCCTTATCCAACCCTAAGTATTACTAGAGTCT AATTTTTGAAACTGAACTTAGCAAATCCAACGATATTGGGTCTGATCATGACTGAAGCAAATCAGGTGAGTGAATAGGTTATGAATGCTCACCATTATGT GTAACTCTTGGTTTGTGGTGATACTTCTTATCTTGCTGTCTTAAGCATGTTTTGGGTTATATGCAGGTGGCTCCTTACAAAAGAATTAGAAGAGTGACAT TTATATCTTCCGTACCCAAAAATGCATCGGGTAAAATTCTTAGGAAGGATCTCATCAAGCTTGCAACGTCTAAACTCTGAAAGAGATTTTAAGCTTCTTT ATATAAGGTTTCTATTGGAGAGATGGTGAATCCTGAACTCCCTTTTTGCTGCTATTTTATGGGTTGTTTATTTTTTGTTAAAATTATATTGAAGACGTTT CAGTCTGTTCTTTGTTCAATAGTCTGTATTTGTAAAAGGAAGCAAGTAATAAGTACTCCTTAATACTCTTACAGAGAATAAAAGTCATAATTGTGTCCTT CGATTTGAATGGAGATGTGTTATGCTCTATTCACAATTTGTTAGAATTTAGAATTCTGTTTGTAGAAGAAAGAAGAGAATGAAAAGGAAATGATGGATTG AATGGAAGAAGAATGAATAGAAAAGTGTAAGAGATAAGAAGAATGTAAATGTGAATGTGATACATCAATTAC
• Tissue: pods
• Gene name: LI_gene_172597;
• Additional information: details;

Expression of Ll_transcript_343770

FPKM

• PAB: 1.1
• PNAB: 0.5
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0.6
• PW2: 0.7
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343770

• Blastp: 4-coumarate--CoA ligase-like 5 from Arabidopsis with 72.92% of identity
• Blastx: 4-coumarate--CoA ligase-like 5 from Arabidopsis with 66.4% of identity
• Eggnog: Amp-dependent synthetase and ligase(COG0318)
• Kegg: Link to kegg annotations (AT1G20510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414061.1)
• Pfam: AMP-binding enzyme (PF00501.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;