Ll_transcript_343776

• Id Trinity: TRINITY_DN49835_c1_g3_i5
• Name Transcript: Ll_transcript_343776
• Sequence: GGTTGAAGGAGCTGATTAAATACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAAGCCTTGTTGCTGACTCATCCTGCTATTTCAGATGCTGCTGTTAT ACCGTACCCAGATAGTGAAGCTGGACAGGTTCCAATGGGATATATAGTGAGGAAGACCGGAAGTAGCTTATCAGAAAAAGAAGTTATGGATTTTGTTGCA AAACAGGTGGCTCCTTACAAAAGAATTAGAAGAGTGACATTTATATCTTCCGTACCCAAAAATGCATCGGGTAAAATTCTTAGGAAGGATCTCATCAAGC TTGCAACGTCTAAACTCTGAAAGAGATTTTAAGCTTCTTTATATAAGGTTTCTATTGGAGAGATGGTGAATCCTGAACTCCCTTTTTGCTGCTATTTTAT GGGTTGTTTATTTTTTGTTAAAATTATATTGAAGACGTTTCAGTCTGTTCTTTGTTCAATAGTCTGTATTTGTAAAAGGAAGCAAGTAATAAGTACTCCT TAATACTCTTACAGAGAATAAAAGTCATAATTGTGTCCTTCGATTTGAATGGAGATGTGTTATGCTCTATTCACAATTTGTTAGAATTTAGAATTCTGTT TGTAGAAGAAAGAAGAGAATGAAAAGGAAATGATGGATTGAATGGAAGAAGAATGAATAGAAAAGTGTAAGAGATAAGAAGAATGTAAATGTGAATGTGA TACATCAATTAC
• Tissue: pods
• Gene name: LI_gene_172597;
• Additional information: details;

Expression of Ll_transcript_343776

FPKM

• PAB: 80.1
• PNAB: 37.5
• PS1: 20.5
• PS2: 15.4
• PS3: 23.7
• PW1: 40.4
• PW2: 36.1
• PW3: 28.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343776

• Blastp: 4-coumarate--CoA ligase-like 5 from Arabidopsis with 81.73% of identity
• Blastx: 4-coumarate--CoA ligase-like 5 from Arabidopsis with 81.73% of identity
• Eggnog: Amp-dependent synthetase and ligase(COG0318)
• Kegg: Link to kegg annotations (AT1G20510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449501.1)
• Pfam: AMP-binding enzyme C-terminal domain (PF13193.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;