| Id Trinity | TRINITY_DN49835_c1_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_343782 |
| Sequence | GTTGTCTCTTTATATCTATTAAAACCGTTTTCTATTCCTTTTACTTTTACTTTGTTTCTTCATCTCCTCCCATTCCCACCCGCCGCCACTTCACCTTCCC CCAACTCTGGCTCGCCGTCGACTCCGTCCCCTCCGCCCTCTCCTCCCTCGGAATCCGAAAAGGCGACGTCGTTCTCCTCCTCTCCCCTAACTCCATCTAC TTCCCCGTCATGTCCCTCGGCGCCATCGTCACCACCACCAACCCTCTCAACACCGCAAACGAAATCGCCAAACAGATTAACGATTCTAAACCTGTTATCG CTTTCACTACCTCTCAACTCATCACTAAGATAACCGCTTCTTCACCGAACCTCCCAATTATTCTCATCGAAGAAAACGAAGAACTTCAACACAGTGGAGT TATTGACACGCTTCAAAATTTGATGAAGAAAGAACCGTCGGTTAACCGAGTTAAGGAGCGAGTTAACCAGGACGATACAGCAACACTGTTATATTCTTCT GGAACAACTGGACCAAGCAAAGGCGTTGTTTCTTCGCACAGGAACTTAATCTCTATGGTGCAAATTGTTCAAAGTAGGTTCAAGAGTGATGATTTACAAA CTTTCATATGCACTGTGCCAATGTTTCATATCTACGGTTTAATAGCATTTGCAACTGGAATTCTAGCTTTGGGTTCAACGGTTGTAGTGCTATCGAAATT CGATATGCATGAAATGCTTTTCTCGATTGAGAAGTTTCGCGCTACGTATCTTCCTCTTGTGCCGCCAATTTTGGTTGCGATGCTCAACAACGCGGAAGCG ATTAGGGCGAAGTATGATCTGAGTTCTTTGCATACGGTGTTATCCGGTGGAGCACCGTTGAGTAAGGAAGTGACAGAAGGGTTTGTGGAGAAGTATCCTA ACGTGGCGATTTTGCAAGGGTATGGGTTAACGGAATCTACTGGTGTTGGTGCTTCGACGGATTCGTTGGAAGAGAGTAGAAAGTACGGCACGGCGGGGCT TTTGTCGCCGGCTACGGAGGGTAAGATTGTTGACCCTGAATCTGGGGAGGCGCTTCCGGTTAACCGGACCGGTGAGCTTTGGCTTAGGGGGCCCACTATC ATGAAAGGTTATTTCAGTAATGCGGAAGCAACTGCATCAACCCTTGATTCACAGGGATGGTTAAAAACAGGGGATCTTTGCTACATTGATGATGATGGAT ACATATTTATCGTTGATAGGTTGAAGGAGCTCATTAAATACAAGGGATATCAGGTTCCTCCAGCAGAACTAGAAGCCTTGTTGCATACCCATCCTGCTAT TTTAGATGCTGCTGTTATACCGTACCCAGATAGAGAAGCTGGACAGATTCCATTTGCATATGTAGTGAGGAAGGAAGGAAGTAACTTATCAGAAAATGAA GTTATAGATTTTGTTGCAAAACAGGTGGCTCCTTACAAAAGAATTAGAAGAGTGGTGTTTACATCTTCTGTACCCAAAAACCCATCTGGTAAAATTCTCA GGAAGGATCTCATTAAACTCGCGACGTCGAAACTCTGAAAGAGATAAAGTTCTTTTACATCAGTTTCTATTGGAGAGATGGTGAATCCTGAACTAGTTTA CGTTTTGCTGCAACTTTCTGGCTTGTTTATTTCTGTTAAGCTTGTATTCAATACAGTTTCAATCTGTTCTTTGTTTAATGGTCTCTATTTGTAAAAGGCA GCAAGTGCTACGTACTCTTAATTAATACTCTTAGGGAGAATAAATAATAATAATTCTGCCTTTCGATTTGAATGGATATAAGTTATGCTCTTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_172597; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343782
| Blastp | 4-coumarate--CoA ligase-like 5 from Arabidopsis with 74.83% of identity |
|---|---|
| Blastx | 4-coumarate--CoA ligase-like 5 from Arabidopsis with 73.06% of identity |
| Eggnog | Amp-dependent synthetase and ligase(COG0318) |
| Kegg | Link to kegg annotations (AT1G20510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414061.1) |
| Pfam | AMP-binding enzyme (PF00501.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |