Ll_transcript_343439

• Id Trinity: TRINITY_DN49838_c1_g1_i5
• Name Transcript: Ll_transcript_343439
• Sequence: ATTTTCCCAATTTCTGCGGACTGCGTTTATTTGTAGTTGATGTTTTCTGAATCTGATCCAATACGTAACGTGCGAGCGTGACTCTATTCTTCTTCTTCTT CTTCCTCTCCCGTAGTAGACCATCTTATTCATCTCATTCAACAAAATCCTTAAAACCCTAACCCTAATATTGTATCAAATCATGGCTCATGATTCACGTC GCAATCATCACCGATCGTCTTCTCCCGATAACGTCGACAAATCCTCCAAACGCCACAAGCACCGCCACCACTCTCACCGACACCATCACAGCAAAAAACG CGATGAAAAAATTGAAAACGATGTTGAAACAGTTGCTGTTGTTCCTTCTCCAATTCCCGATCCGTATATCCGTCTCACTCGTGACGATGTAGAGGAGGGA GAGATTCTCGAAGAGGATGACGATGTTGCAAAAAAGCACTCGGAAACTGAGACCGAACATGGTGAAATCGAGGTGATTGGAGATCGAGATTCTCGATCTG ATAAGAAAAATCTGGTATATCTCTTTCGGTTTTATCTATCCATTATTTATTTATTTAATTTAACGGACATTGCTACATGTGACACCTGTTTGGTTGCTGA GAAAGCAGATGCCATTTTAATCGATTTCAATTAGGTTTTTGCTTTTGTTATTTTTTAATAAGACCAGAGTTTATATATGTTTGAAATCTAATGTAATAGT AGTAGGTGTTTCAATGCATCTGACTTTATCTCGGTGACCAAACAGAGCACTTTGATTATGTATTCTGAATTTGTATAATCAGTTTTTTTATTCGTGAGTG CTTGGTAGAGTTCCCATTCAGTGTCATAGATATGTAAGAACCTGCTTGCACTACACGAACATGAGTGAATTGCAAAAGAAGTCTCCCTAGGCGTTTCAGT GAAGACTGGTGGCTTACAGTTAATTTGGACTTTTGACTAAAAGTTCAAAAACTAGAAGTGAAGATATTGACAATGATAAGGTTATTAGTCATGAAGATAA TGGGTCTCCTAATCGTTCAACCACTGGGCCTCAGGATGGGAAGGATGCCGGATCTAGATCCGATGGTGCAGGCAATGGGCATTTGGATCCTAAATTTTCC AAAGGGGATAAGTGGCAGAACAGGGAACTTGGAAGTCTTAAAGGAAATGAGAAACTAAAAGATAACTACGACAATGAAGCAATTGGGGCTAATGGGGGAA AAGTCAATAACCGCTGGAATTCGTCCTCAGAAAGTGGAGAAGAAAAGTATAGAGTGGCAAGAAATTCTCCTCATGATAGATACAGAAGTCGATCAAGATC AATTGGTCATAATAGGGAAAGGTCTCGATCTCAAAGTATAGTAGATGAACATGCTCATTCTAAGAGAAGGCACTCTGGGGAACAAGGGACCCATGATTAT ATCAACAGACATAAGACTGACTATGATGAAGAAAGAATGAAGCCATGCCGAAAGGAGCATCATCATCGCAGTATAGATTTGGTGGTAGATGATAGAAGGG AATACATCACTAAATATCACAGTAGGGAAGCCCGGGATAGGGATAGAAGTAGGGACATGGGTGTGGATAGAGATTTAGACAGGGAACGTAAAAGAGGGGA AAGAATCAGGAGTAGGGAGGTTGATTGGGTCCGTGGAACAGAGAAAGAACGTGGAAGGAGCAAGGAGAGGGATAGAAGGGATGTTGAAAAAGTTCAGATC AGGGAAAGGGAGAAGGCTAGGGATAGAAGAGGAGAAAAGGACATTGAAAGAAGCTGGGAGGCAGTGTACGGGAGGGACAGGAGAAGGGGAAATGAGAGAG ATAGGAGTGTGGATAAAACACGGGGTGGTGAGAGAGAAAGAGAGTGGGAGAGTGAAAGAGGTGATGTAAATCAGGAAAGGTATAATGTTAGGGAGCGAGA GAGGCACTATGATAGATATCGGCAAAGGAGTAGAGACAATGCCAATGGTGAGGGTAATGATCTGCATCATGAGGATGGTAATGACAATCGAGATAGATAT AGAAAACATTCAAGACATGAAGAAACTGACTACCATCAGGAGACAAAAAGAAATTCTGATCCTGTAAAGGCTTTTAAATCTGTGGGAAGTATCATGGAAG AGGATGAATGCCAACTAGAAAGAGGTGAGATTGAGGATGACATAGATGAGGATGCATTGCAATTACCTGAACAAGAAGAAGATCTCAACAGAATTAAAGA GGAGAGTAGGAGGAGAAGAGAAGCCATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTTGAACAAGTGGTCGAAAATGAAGGGAAAGATACAGAACCT ATGGACATTACTGAAGCACTTGATGGTAAGAATGACGCTGATGATTCAGAAACATCATTTGCAGTTGGGAAATCTCCTGAAAATTTGAAAGTTGCTTCTG AAAAAATATATGGTGCTCATGGTCTGGGAGAGGGAACTCCAAAGAGCGAGAGATCAGATGACAAATTTTGTGATGATATATTTGGTGAGACACCAACTGG AGTCCGGAAATCTGGGAAAGGAGATGGTTTACTAATTGAAAAGGTTGGACTCCATGACAATTGGGATGATGCAGAGGGCTATTACAGCTATCGTTTTGGT GAAATACTTGATGGCCGATATGAAGTCACCGCTGCTCATGGAATGGGTGTCTTTTCAACAGTTGTTCGAGCGAAGAATCTTAAGGATAGTAATGGAGAGC CCGAAGAAGTAGCTATAAAAATTATTCGTAGTAATGACACTATGTACAAGGCTGGTATGGATGAGTCAATCATATTGAAGAAATTAGTAGGTGCTGATCC AGATGATAAGCG
• Tissue: pods
• Gene name: LI_gene_172617;
• Additional information: details;

Expression of Ll_transcript_343439

FPKM

• PAB: 1.4
• PNAB: 3.1
• PS1: 5
• PS2: 2.6
• PS3: 4.4
• PW1: 2.3
• PW2: 6.5
• PW3: 4.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343439

• Blastp: Serine/threonine-protein kinase PRP4 homolog from Rattus with 49.12% of identity
• Blastx: Serine/threonine-protein kinase PRP4 homolog from Mus with 49.12% of identity
• Eggnog: PRP4 pre-mRNA processing factor 4 homolog B (yeast)(ENOG410XPAX)
• Kegg: Link to kegg annotations (291078)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427633.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;