| Id Trinity | TRINITY_DN49840_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_341236 |
| Sequence | GGTGGATGTGAGGGTTAAGAGATAAATAGTAGAATATATGAGAGATAAATCATTTTGTTTGATTCATAATTGTTTGTTCCAAACTTGGAATGGTGATGGC TTGTTGCATATCTGTGCTGAACTTGAATCTCCCAAATGCCTCATCCAAATTCAATCCAAACCCAATTCCACATCATTCTACCTCATTTTCAACTTCCAGA TTCTTAAGGAAACAACAACAACCTCAAAAACAACAACCTCGGATAGTTTGCATGGATTATCCTCGTCCTCAACTTGACAACACTGCTAATTTTGTTGAAT CTGCTCACTTTTCTTCAACTTTCCGCACTTCTCCACGTCCCACCAAACCCTTGAACATTCTTATTGCTGGCGCAGGATTGGCTGGTTTGTCAACCGCGAA ATATTTGGCAGATGCTGGTCATAAACCTATTTTGCTGGAGGCAAGAGATGTTCTCGGAGGAAAGATTGCTGCATGGCAAGATGAAGATGGAGACTGGTAT GAGACAGGCCTACATATATTCTTTGGGGCTTACCCTAACATACAGAACCTGTTTGGAGAACTTGGTATTAATGATCGGTTACAATGGAAGGAACATTCTA TGATTTTTGCAATGCCAAACAAGCCTGGCGAATTTAGTCGGTTTGATTTTCCGGACGTCCTTCCTGCTCCATTAAATGGAATATGGGCGATACTGAAGAA CAATGAGATGCTGACTTGGCCAGAGAAAGTCAAATTTGCAATTGGACTTCTGCCAGCTATGCTTGGCGGGCAGCCATATGTTGAGGCTCAAGATGGCCTT TCTGTTGAAGAATGGATGAAAAAGCAGGGCGTTCCTGAACGAGTAACTGATGAAGTTTTCATAGCAATGTCAAAGGCACTCAACTTCATCAACCCTGATG AACTTTCAATGCAATGTATATTGATTGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCTAAGATGGCCTTTTTGGATGGCAATCCCCCCGAAAGACT TTGTATGCCAATTGTTGATCATATTCAGTCCTTGGGTGGTGAAGTTCATCTCAATTCCCGCATTCAAAAAATTGAGCTAAATGATGATGGCACGGTAAAG AGCTTCTTACTGAATAATGGGAAAGTGATTGAAGGGGATACTTATGTGTTTGCAACTCCAGTTGATATTCTGAAGCTTCTTCTGCCTGACAGCTGGAAAG AGATTCCATATTTCCAGAGATTGGAGAAATTAGTTGGAGTTCCAGTCATAAATGTTCACATATGGTTTGACAGGAAACTGAAGAACACATATGATCACCT TCTCTTTAGCAGGTCTTCCTCACACTTTGAAACACATATGATCCGAAATGCTGTTCACTTTATGTCTCACTCTTTTGTAATACATAAACTCATATTATGT CTCATCTTTGTGCTTCATAAGGTTCATATATTCTTATTATGCTCTCCTCTAGTTGCCAAATTAGGTACATATAACATAGAATGGAACAATTCCCTCCCTC CTTCTCCTCCATGGGTTAAGAATATAAATGATAATAGAATGTAATATTTTTCTTCATGCAGAAGTTCCCTTCTGAGTGTATATGCTGACATGTCAGTAAC TTGTAAGGTAAAAGCCCCACCTCACACGCCGTTGATTTGCACTGATGTATTTCCTCAACCCGTTCAAATGTTGTGGCCTTCATGTTTGTATATAGAGAGG GACACATCTAAATTAATTGAGTTAATGCTTCTCGGTAAACGTTACAGTCTTTCATCTCTCCATCTCTCTGCACTAATAACTCAGTCTTGAGTTATTTATG TAACATTTTTTGTTACCGGTGATTGAATTTCATCTGCGTCTAACTATTTTTCTGGTTATCATAGAACATTGGCATGTTGTTTGTGTAACTGTGTGTCACT ATGTTATGCAGGAATATTATAATCCAAACGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172637; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341236
| Blastp | Phytoene dehydrogenase, chloroplastic/chromoplastic from Soja with 92.48% of identity |
|---|---|
| Blastx | Phytoene dehydrogenase, chloroplastic/chromoplastic from Soja with 92.46% of identity |
| Eggnog | Desaturase(COG3349) |
| Kegg | Link to kegg annotations (547970) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415582.1) |
| Pfam | NAD(P)-binding Rossmann-like domain (PF13450.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |