Id Trinity | TRINITY_DN49840_c3_g1_i11 |
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Name Transcript | Ll_transcript_341246 |
Sequence | ATTTGTGGTTTTTCTTGTTTGTTTTGGTTTTTGTTTCTTTTGATTAATGTGTATTTCAAATTATCACAGGATTGGCTGGTTTATCAACTGCGAAATATTT GGCAGATGCTGGTCATAAACCAATATTGCTGGAGGCAAGAGATGTTCTTGGTGGAAAGGTTGCTGCATGGCAAGACGAAGATGGAGACTGGTATGAGACA GGCCTACACATATTCTGTAAGTTTGTTAATTGTCAGGCTTAAATTTCTGTTATATATTTGTTTCCTTAATTGCTTGCGAAAAGTTCTGCATTTTCCTATT CCTTTAGTGAACATTTTTCTTTTCCTTTGATGAGTAAACTGTTTGAGAGAAAAAAAGAGTGGAGGATCAAGAATCCTTCTAGATATACTACTACAGAAAC CATAGGAGAAAGAAATTGAAGAGAAAATGCATCAGGTCAAAATAATAAAGTAAAAGAGAAGCACATAACAGAACCATTCTTGGGCCTTATCCTAATAGCT TAAGCTATTGGTAGAGTTGGCCATTGGCACAGTATCAAAGCCTATTGCCTTCATGACCAAGTGGTTACGAGTTTGATCTATTCCACCCTCCATTCTTTGG ATTAAAAGTTAAATTTCAAATGGTTTTTGCATGAGTGGGCAATTTGGCCTTTACATTACTGTGCTTTTGTTGTGAGTTGGTCCTTGCCCATGTATTGAAC TATTTTTATCTCTCATTTTAGTTTTTTCTTTCTAAATAAATCAAATAGTGGAAATCATTTCTAATATTTAATCAATATGGTTATTTTGATTTTTGGAATC CTTGTTCATAGTTATCCTTGCTTTACATTTTTTTCTTTCCAAAGTTGGGGCTTACCCTAACGTACAGAACCTGTTCGGAGAACTTGGTATTAGTGATCGG TTACAATGGAAGGAGCATTCTATGATTTTTGCAATGCC BLAST |
Tissue | pods |
Gene name | LI_gene_172637; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341246
Blastp | - |
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Blastx | Phytoene dehydrogenase, chloroplastic/chromoplastic from Zea with 97.96% of identity |
Eggnog | Desaturase(COG3349) |
Kegg | Link to kegg annotations (542329) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438286.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |