Id Trinity | TRINITY_DN49840_c3_g1_i4 |
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Name Transcript | Ll_transcript_341239 |
Sequence | GCGAAATATTTGGCAGATGCTGGTCATAAACCTATTTTGCTGGAGGCAAGAGATGTTCTCGGAGGAAAGGTTTTCCTTCTAACTTAATCACCTTTGTCAA TAACTTATCACTTTGCACGAGCACCGCTGATCATTTTAGCTTTTTGTTTAATTAAATAGGAAACCTTTTCTTACTTGACTGCTTCATCTAATGATCACGT TGGCTTCATGTGATCAGTAATTCGAACTTCATCTGAATTAATTTCGAAAAGGCTTTAAAGTGGTAAATTTGAACTTTATCAACTGGCTCATTGAAGATTA CCATAGTATATGCAACCTGTTTATTATAATTCAATTTTTAGCACGCTGTGTGTTTATACTCTTGTCACATTTTAAGATTGCTGCATGGCAAGATGAAGAT GGAGACTGGTATGAGACAGGCCTACATATATTCTGTAAGTTTGTTAAAATCTCAGCCTTAAAATTTCTGTCATACATTTGTTTCCATGATTGCTTGCAGA AAATTCTGCATTTTTAAATTTCTTTAGTGAAACTTCTCTTTTCCTTTGATAAAAGAACTCTGAGAGGAAAAAAGAGAGTGGAGGATCAAGAATCCTTGTA GATATACTAAAGTTGGAGAAATAAACTAAAGAGAAAATACAGCAGCTCAAAATAATAAAGTAAAAGAGAAGCACATAACAGAAATATTTTTGGGCATTCT CAAGCTATTGGTACGATTGGGCCTTGGCAAAGTATCAAAGCCTTTTGCCTCCATGACCAAGTGGTTAGGAGTTTGATCTTTTCTACCCTCCATTCTTTTG GTTTAATATTAAATTTCTATAAGGTTTGGATTAAAATGTTGTCCAAGCTTCAATCTCAATGACTCTTTTTAGTTTTATTTCTAAATGAATCATTTAGTGG AAATCATGTCTAACATTTAATCAATATGGTGATTTTAACTTTTGGAATCCTTTTTTCCTAAAGTTGGGGCTTACCCTAACATACAGAACCTGTTTGGAGA ACTTGGTATTAATGATCGGTTACAATGGAAGGAACATTCTATGATTTTTGCAATGCCAAACAAGCCTGGCGAATTTAGTCGGTTTGATTTTCCGGACGTC CTTCCTGCTCCATTAAATGGAATATGGGCGATACTGAAGAACAATGAGATGCTGACTTGGCCAGAGAAAGTCAAATTTGCAATTGGACTTCTGCCAGCTA TGCTTGGCGGGCAGCCATATGTTGAGGCTCAAGATGGCCTTTCTGTTGAAGAATGGATGAAAAAGCAGGGCGTTCCTGAACGAGTAACTGATGAAGTTTT CATAGCAATGTCAAAGGCACTCAACTTCATCAACCCTGATGAACTTTCAATGCAATGTATATTGATTGCTTTAAACCGATTTCTTCAGGAGAAGCATGGT TCTAAGATGGCCTTTTTGGATGGCAATCCCCCCGAAAGACTTTGTATGCCAATTGTTGATCATATTCAGTCCTTGGGTGGTGAAGTTCATCTCAATTCCC GCATTCAAAAAATTGAGCTAAATGATGATGGCACGGTAAAGAGCTTCTTACTGAATAATGGGAAAGTGATTGAAGGGGATACTTATGTGTTTGCAACTCC AGTTGATATTCTGAAGCTTCTTCTGCCTGACAGCTGGAAAGAGATTCCATATTTCCAGAGATTGGAGAAATTAGTTGGAGTTCCAGTCATAAATGTTCAC ATATGGTTTGACAGGAAACTGAAGAACACATATGATCACCTTCTCTTTAGCAGAAGTTCCCTTCTGAGTGTATATGCTGACATGTCTGTAACTTGTAAGG AATATTACAATCCAAACCAGTCTATGTTGGAGTTGGTTTTTGCACCAGCCGAAGAATGGATTTCACGTAGCGATGAGGATATTATTGGTGCCACAATGTC TGAACTTGCCAAACTCTTCCCTGATGAAATTTCTGCTGACCAAAGCAAAGCAAAGATTCTCAAGTACCATATTGTTAAAACACCAAGGTCGGTTTACAAA ACTATTCCAAATTGTGAACCTTGTCGTCCAAGACAAAGATCTCCTATAGAGGGTTTCTATTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAA TGGAAGGTGCTGTTCTTTCTGGAAAGCTTTGTGCACAGGCTATTGTACAGGATTGTGAGTTACTTGGTGGTAGGAGCCAAAAAAGGGTAGCTGAAGCAAA TGCCATATAACAGAAACATGATTTGAAGAGAAAGTGTGCAACAATAATACATCACCATCAACTTCATTTCTACCTTGGCTTATAACATCATCAACTTCAC TTCATTGGAACAAATAAAGGAAAAACATTTTTTAAAAAAGAAAAATATTGGGAGTATTGTAGGAAAATATTTTGACAATGATATGTGCAGTCAAATATAG GAAAAACCCAGCATATGTAAAACCTGCAATAACAAATAAAGGTAATAAATGATATTTTATTCAAAAATTGCAATATTTCTCTTTTTTGTTTTCAAGCGAT GATGTATATTTTTGTTAGGAAGTTTGATGGTATGGTAGCAAGGTACACACTTTTTAATCTATTTAGGAGTTTTGTGTGTGTAACTTGTAGTCTAGTATTA CATTAGGACGAGGGATCGGTTTATACTCGTCTTAAGTTACACTCAATCTCATTCATTCATTTTCTTAGACTCCACAACTAATCTTATCTâBLAST |
Tissue | pods |
Gene name | LI_gene_172637; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341239
Blastp | Phytoene dehydrogenase, chloroplastic/chromoplastic from Soja with 92.8% of identity |
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Blastx | Phytoene dehydrogenase, chloroplastic/chromoplastic from Soja with 91.71% of identity |
Eggnog | Desaturase(COG3349) |
Kegg | Link to kegg annotations (547970) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415582.1) |
Pfam | Flavin containing amine oxidoreductase (PF01593.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |