| Id Trinity | TRINITY_DN49840_c3_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_341243 |
| Sequence | TTCACTCCAAATTCAAATTCAAATTCAAATTCATTATCATTATCATTTGGTTCTTCTTTCACTACTTTCAGACATGTTGCTACTGCTTCTTCTTCTTCAA GTAAAAGGTTGTCGAGGGTTCCATTAAAGGTATCTTGCATCGATTATCCACGCCCTGAGCTTGAAAACTCTGCTAATTTTCTTGAAGCTGCTTACTTCTC TTCAACTTTTCTTGCTTCTCCACGACCCACCAAACCATTGAAGGTTGTTATCGTTGGTGCAGGATTGGCTGGTTTATCAACTGCGAAATATTTGGCAGAT GCTGGTCATAAACCAATATTGCTGGAGGCAAGAGATGTTCTTGGTGGAAAGGTTGCTGCATGGCAAGACGAAGATGGAGACTGGTATGAGACAGGCCTAC ACATATTCTTTGGGGCTTACCCTAACGTACAGAACCTGTTCGGAGAACTTGGTATTAGTGATCGGTTACAATGGAAGGAGCATTCTATGATTTTTGCAAT GCCAAATAAGCCTGGAGAATTTAGTCGATTTGATTTTCCCGAGGTCCTTCCATCTCCTTTAAACGGAATATGGGCAATATTGAGGAACAATGAGATGCTG ACTTGGCCAGAGAAAGTCAAATTTGCAATTGGACTTCTGCCAGCTATGCTCGGTGGGCAGCCTTATGTTGAGGCTCAAGATGGCCTTTCTGTTCAAGAAT GGATGGAAAAGCAGGGCATTCCCGAACGAGTAACTGATGAGGTGTTCATAGCAATGTCAAAGGCACTCAACTTCATCAACCCTGATGAACTTTCAATGCA ATGTGTATTGATTGCTTTAAACAGATTTCTTCAGGAGAAACACGGTTCTAAGATGGCCTTTCTGGATGGCAATCCCCCCGAAAGACTTTGTAAGCCAGTT GTCGATCATATTCAGTCATTGGGTGGTGAAGTTCACCTCAATTCTCGCATTCAAAAAATTGAGCTAAATGAGGATAGCACGGTGAAGAGCCTCTTACTGA GTAATGGGAAGGTGATTGAAGGGGATACTTATGTGTTTGCAACTCCAGTTGATATTCTGAAGCTTCTTCTGCCTGACAACTGGAAAGGGATTTCATATTT CCAGAAATTGGAGAAATTAGTTGGAGTCCCGGTCATAAACATTCACATATGGTTTGACAGAAAACTGAAGAACACGTATGATCATCTTCTCTTTAGCAGA AGTTCCCTTCTGAGTGTATATGCTGACATGTCAGTAACTTGTAAGGAATATTATAATCCAAACGAGTCTATGTTGGAGTTGGTTTTTGCACCAGCCGAAG AATGGATTTCACGTAGCGATGAGGATATTATTGGTGCCACAATGTCTGAACTTGCCAAACTCTTCCCTGATGAAATAGCTGCAGACCAAAGCAAAGCAAA GATTGTCAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTACAAAACAGTTCCAGATTGTGAACCGTGTCGACCCGTACAAAGATCTCCTATAGAGGGT TTCTATTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGTGCTGTTCTTTCTGGAAAGCTTTGTGCACAGGCTATTGTACAGGATT GTGAGTTACTTGGTGGTAGGAGCCAAAAAAGGGTAGCTGAAGCAAATGCCATATAACAGAAACATGATTTGAAGAGAAAGTGTGCAACAATAATACATCA CCATCAACTTCATTTCTACCTTGGCTTATAACATCATCAACTTCACTTCATTGGAACAAATAAAGGAAAAACATTTTTTAAAAAAGAAAAATATTGGGAG TATTGTAGGAAAATATTTTGACAATGATATGTGCAGTCAAATATAGGAAAAACCCAGCATATGTAAAACCTGCAATAACAAATAAAGGTAATAAATGATA TTTTATTCAAAAATTGCAATATTTCTCTTTTTTGTTTTCAAGCGATGATGTATATTTTTGTTAGGAAGTTTGATGGTATGGTAGCAAGGTACACACTTTT TAATCTATTTAGGAGTTTTGTGTGTGTAACTTGTAGTCTAGTATTACATTAGGACGAGGGATCGGTTTATACTCGTCTTAAGTTACACTCAATCTCATTC ATTCATTTTCTTAGACTCCACAACTAATCTTATCTâBLAST |
| Tissue | pods |
| Gene name | LI_gene_172637; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341243
| Blastp | Phytoene dehydrogenase, chloroplastic/chromoplastic from Soja with 85.87% of identity |
|---|---|
| Blastx | Phytoene dehydrogenase, chloroplastic/chromoplastic from Soja with 89.17% of identity |
| Eggnog | Desaturase(COG3349) |
| Kegg | Link to kegg annotations (547970) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438286.1) |
| Pfam | FAD binding domain (PF00890.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |