Ll_transcript_342894

• Id Trinity: TRINITY_DN49841_c1_g2_i1
• Name Transcript: Ll_transcript_342894
• Sequence: CTAAACGCTTCTCCAATGTTCCTGATCCATCATGAACAATCTATCGTTAACTTTCCAGCTACAAGAGTGAACTAGTAGATTCTTCTTCAATATCTTCTCC CATCAAGAACAATCCGTTTACCAAAAACCATGTAACACACTTCCTATAAATACTCACACATCTTCATTCTCCCTTCACTCGTCAAAACACTCAAATCAGC AACAAAACAACATCAACCAAATCAGCAACAAAACCCATTTTCTACTTCATTAACATAAAATGTCGATTATCCCAAGCTTTCTTGGTACTGGACGAAGGAG CAACGTCTTCGACCCATTCTCCCTCGACATATGGGACCCATTCCAAGACTTCCCCTTGCGCCCCGCCACCTCCGGCTTCGACGCGGAGACAGCCGCCGTG GCCAACACCCGTATCGACTGGAAGGAGACACCGGAGGCGCACGTGTTCAAGGCAGACCTTCCAGGGCTGAAGAAGGAAGAAGTGAAGGTGGAAGTGGAAG AGGGTCGTGTGCTGCAGATAAGTGGTGAGAGGAATAAGGAGAAGGAAGATAGGAATGATAAGTGGCACCGTGTGGAGCGTAGCGGTGGCCGCTTCCTCCG CCGCTTCAGGCTGCCGGAGAATGCAAAGGTGGATGAGGTGAAGGCTTGCTTGGAGAATGGAGTGCTCACTGTTACTGTTCCAAAGGAAGAGGTTAAGAAG CCTGATGTGAAGCCTGTTCAGATCACTGGTTAAGTTTGTTGCTGTTGTGTATGATATCATATGTTATGAATCAGATATGAATGTTATGTAAAATAAATGT AGAGATGGATGGTCTCTGCTATTAGTATAGTTGTGTGTAATTCTGCTGTATGGTGAAGTATTTTAGTTTTTGCTAAATTTATAATAAGAGATTCAATGTT TCTTTTGACCGATTTGTAATCACTCTGGTTTTTTTTCTATATTATTTCATCACCATTTCCTTTTATAAATAGGGATCATATATAAAA
• Tissue: pods
• Gene name: LI_gene_172641;
• Additional information: details;

Expression of Ll_transcript_342894

FPKM

• PAB: 0.9
• PNAB: 0.7
• PS1: 4.3
• PS2: 54.2
• PS3: 2
• PW1: 14.1
• PW2: 17.3
• PW3: 26.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342894

• Blastp: 17.3 kDa class I heat shock protein from Soja with 74.52% of identity
• Blastx: 17.8 kDa class I heat shock protein from Daucus sect. Daucus with 81.48% of identity
• Eggnog: response to heat(COG0071)
• Kegg: Link to kegg annotations (100526870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418248.1)
• Pfam: CS domain (PF04969.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;