Id Trinity | TRINITY_DN49842_c0_g1_i11 |
---|---|
Name Transcript | Ll_transcript_342499 |
Sequence | TAAACTATCCCCCCCCTTTCATTTCACCATTTATTTGTGTTGTTATTATTGCTTGGACTTCATGGACAATCGAAGGAATTCGTGGCAATAATAGATAGAG TTCACTGTTTTTTATGTATTTATTATTTTGATGATTGATATTTTTCATTTTCGTTTGTTATTTTGAGCCCTTCTGTTTACTGTTGCAGTGTGATTGGTGG TGAAGATTAGGTTTCTTTGGAGTTTTAGAAATTTTCGAGGTCTCGGTCAAGTAGAGTGGGTGAATTGAATTGGATTGGAATTAGGTCTTGTGTGCAATTT GGTTGGAAGGAAGAGTGAGTTGAGATGAGTGTGGTGGGGTTTGACATTGGTAATGAGAACTGTGTGATTGCCGTAGTAAAGCAGCGTGGGATTGATGTTT TGTTGAATGATGAATCCAAACGCGAAACCCCTTCGGTTGTCTGCTTTGGTGATAAACAACGGTTTTTGGGGTCTGCTGGTTCTGCTCATGCTATGACGCA CCCCAAGTCCACGATATCTCAAGTGAAGAGACTGATAGGCAGGAAATTTGTGGACCCTGATGTCGAGAAAGAGCTGAAAATGCTCCCTGTTGAAACCTCT GAAGGCCCAGATGGTGGTATTTTGATTCACTTGAAATACTTGAAAGAGACTCATACATTTACACCAGTTCAAATAATGTCCATGCTCTTTGCTCACTTGA AGACCATGACAGAAAAAGATTTGGAAACATCCATTTCGGATTGTGTCATTGGGATCCCACCATACTTTACCGAGTTACAGAGACGGACATATCTTGATGC AGCAAAAATTGCTGGGCTGAAGCCTTTGAGATTGATCCATGATTGTACTGCAACTGCTCTTACTTATGGAATGTACAAAACAGATTTTCTCAGTGCAGGT TCAGTTTTTAATGTTGCGTTTATTGATATTGGCCACTGCGATACTCAGGTCTCTATTGCAGCATTTGAATTTGGGCAAATGAAGATTCTTTCACATACTT TTGATGCGAGCTTAGGGGGGAGGGACTTTGATGAGGTTCTATTTAGTCACTTTGCAACAAAATTTAAGGAACAGTACAGCATTGACGTGTATTCTAATGC GAAGGCATCTATTAGGTTGCGTGCAGCATGTGAGAAGTTGAAGAAAGTTTTGAGCGCAAATCTAGAGGCACCTCTAAATATTGAGTGCTTGATGGATGAG AAAGATGTTAAGGGTTTTATCACGAGGGAAGAATTTGAGAACTTGGCATCAGGATTATTGGAGAAAATTTATATTCCTTGCAACAAAGCACTAACTGATG CAGGCTTGACTGCGGAGAAGATTTCTTCAGTGGAGCTTGTTGGTTCAGGTTCTAGGATTCCAGCTGTAGCTAGATTATTAACTTCTCTATTCAAGAGAGA ACCTAGTCGTAAGCTGAATGCAAGTGAATGTGTAGCTCGTGGTTGTGCTTTACAGTGTGCAATGCTCAGTCCCGTTTACCGTGTTAGAGAATATGAGGTC CAGGATTATATTCCTTTTTCAATCGGACTTTCATCAGATGAAGGTCCAATTTTTGCAGGATCAAATAGTGTACTTTTCCGAAAAGGCCAACCGATTCCAA GTATTAAAGTCATAACATTTCAGCGAACTGGTTTATTCCATTTGGAAGCATTCTACGCTGATCCAAATGAACTACCACGTGGGACATCTCCTAAAATTAG TTGCTTCACGATTGGTCCTTTCCATGGATCCCATGGTGATAAGGCGAGAATCAAAGTTAGAGTTCAACTAAATTTGCATGGCATTGTCGTGATAGAATCA GCTGTATTGATCAAGGATCATGTGGGTGGTTCAGTTACAACGGGTGATAATCATTCCAATTCTGATGCAATGGATATTGATTCGATTTCTGAGACGGATG CCAATGGCATTGAAGATAGTGTCAATAAAAAGTGTGAATCTCCACGTAGTTCTGCTGATGGTACAAGAAAAGATAAAGCTAACAGACGGCTTGATGTGCC AGTGAGTGTGAATATATATGGTGGAATGACAGAGGCAGAGATCTTAGAAGCTCATGAGAAAGAACTCCAGTTGGCCCAACAAGACAAAACTGTGGAGCTA ACTAAAGACAAGAAAAATAGCTTGGAATCTTATGTCTATGAGACGAGGAATAAGCTCTCCAGCACGTATCGGAGCTTCGCAAGTGAGCAAGAGAAGGATG ACATTTCTAGGAGCCTGCTAGAGACTGAAGAGTGGCTTTATGAGGATGGTGATGATGAAACTGAGCTTGCTTATTCTTCAAAACTGGAAGATCTGAAGAA GCTGGTGGATCCAATCGAGAATCGGTATAAAGATGAAGAAGGAAGAACACAAGCTACAAGAGATTTGTTGAAGTGCATTTCAGATCATCACACATTTGCA GATTCTTTTCCACCTCAGGATAAAGAACAAGTCATCAATGAGTGCAATAAAGCAGAGCAGTGGATAAAAGAGAAGTTGCAGCAACAAGATTCTGTTCCCA AGAACACTGACCCAATCTTATGGTCAAGTGATATTAAGAACAAGACAGAAGAATTAAACTCAATATGCCAACAGATATTGGGATCCAGGGATTCTCCAAT TTCAGAAGACAATTATGAAGATAAGCAGGACACTTCAAATCATCCCTGAATATATTGATTTTGGTGATACGTTATGAGCTGAATGACTTATATGTTTTCA TTACTAATATATACACTGACAAATATAGAAATTTTTAAGTGCCATTTTCTTTATTTTATTTCTATCTTTCCCCCCTTGGTTTGAAGATTTGAAAGAGGTA AATCTAATTAGATGAAACAGTGAGGATCAGTGCAATCAATGTTTTTCCAAGGTTTCTTGTTTTGTGTATTTTGATATCTTATGTAATGTGAAATACTTTA TTCAAATGAATAAAATAGATTCTGCTATAGGGGAGAAAAATGTGTGAATCATTTATATGTAATATTAGTGGCACTTGTTTCTGCATTGTGCTTGAGGATA TCATTAGTATTTGGAGTATAGTAGTATAGTGAGGCTTGTAACATAGAACTTGTTGCTCAACTTTATGACATTAGATTGTTATTAAGATTGTGCCCATGCA ATGCATGGTGACTAGTTAAT BLAST |
Tissue | pods |
Gene name | LI_gene_172645; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342499
Blastp | Heat shock 70 kDa protein 16 from Arabidopsis with 59.58% of identity |
---|---|
Blastx | Heat shock 70 kDa protein 16 from Arabidopsis with 59.58% of identity |
Eggnog | Heat shock protein(COG0443) |
Kegg | Link to kegg annotations (AT1G11660) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425878.1) |
Pfam | Hsp70 protein (PF00012.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |