Ll_transcript_342480

• Id Trinity: TRINITY_DN49842_c0_g1_i2
• Name Transcript: Ll_transcript_342480
• Sequence: ATAACAAATTAGTTCAACCATATTATACCCAAAAAAATCTAATAATTTCTCCGCGGTCCAAATGTATGAACAAAATTGAAATTTGCCCCATATAAATGAT TATTCTGAAATTTGCCCTGGTTTTTGACCTTTGAATCCTTTAGTTTTGATCCAATGAGAAGCGAAGATTTTTGTCCAGATTCTTCTACCATTCTCTCCAC TCGCACTACGTAATATTGCAATCCCAGAGGCTTCCTGATTCAATTATTCGTTAGTGTGATTGGTGGTGAAGATTAGGTTTCTTTGGAGTTTTAGAAATTT TCGAGGTCTCGGTCAAGTAGAGTGGGTGAATTGAATTGGATTGGAATTAGGTCTTGTGTGCAATTTGGTTGGAAGGAAGAGTGAGTTGAGATGAGTGTGG TGGGGTTTGACATTGGTAATGAGAACTGTGTGATTGCCGTAGTAAAGCAGCGTGGGATTGATGTTTTGTTGAATGATGAATCCAAACGCGAAACCCCTTC GGTTGTCTGCTTTGGTGATAAACAACGGTTTTTGGGGTCTGCTGGTTCTGCTCATGCTATGACGCACCCCAAGTCCACGATATCTCAAGTGAAGAGACTG ATAGGCAGGAAATTTGTGGACCCTGATGTCGAGAAAGAGCTGAAAATGCTCCCTGTTGAAACCTCTGAAGGCCCAGATGGTGGTATTTTGATTCACTTGA AATACTTGAAAGAGACTCATACATTTACACCAGTTCAAATAATGTCCATGCTCTTTGCTCACTTGAAGACCATGACAGAAAAAGATTTGGAAACATCCAT TTCGGATTGTGTCATTGGGATCCCACCATACTTTACCGAGTTACAGAGACGGACATATCTTGATGCAGCAAAAATTGCTGGGCTGAAGCCTTTGAGATTG ATCCATGATTGTACTGCAACTGCTCTTACTTATGGAATGTACAAAACAGATTTTCTCAGTGCAGGTTCAGTTTTTAATGTTGCGTTTATTGATATTGGCC ACTGCGATACTCAGGTCTCTATTGCAGCATTTGAATTTGGGCAAATGAAGATTCTTTCACATACTTTTGATGCGAGCTTAGGGGGGAGGGACTTTGATGA GGTTCTATTTAGTCACTTTGCAACAAAATTTAAGGAACAGTACAGCATTGACGTGTATTCTAATGCGAAGGCATCTATTAGGTTGCGTGCAGCATGTGAG AAGTTGAAGAAAGTTTTGAGCGCAAATCTAGAGGCACCTCTAAATATTGAGTGCTTGATGGATGAGAAAGATGTTAAGGGTTTTATCACGAGGGAAGAAT TTGAGAACTTGGCATCAGGATTATTGGAGAAAATTTATATTCCTTGCAACAAAGCACTAACTGATGCAGGCTTGACTGCGGAGAAGATTTCTTCAGTGGA GCTTGTTGGTTCAGGTTCTAGGATTCCAGCTGTAGCTAGATTATTAACTTCTCTATTCAAGAGAGAACCTAGTCGTAAGCTGAATGCAAGTGAATGTGTA GCTCGTGGTTGTGCTTTACAGTGTGCAATGCTCAGTCCCGTTTACCGTGTTAGAGAATATGAGGTCCAGGATTATATTCCTTTTTCAATCGGACTTTCAT CAGATGAAGGTCCAATTTTTGCAGGATCAAATAGTGTACTTTTCCGAAAAGGCCAACCGATTCCAAGTATTAAAGTCATAACATTTCAGCGAACTGGTTT ATTCCATTTGGAAGCATTCTACGCTGATCCAAATGAACTACCACGTGGGACATCTCCTAAAATTAGTTGCTTCACGATTGGTCCTTTCCATGGATCCCAT GGTGATAAGGCGAGAATCAAAGTTAGAGTTCAACTAAATTTGCATGGCATTGTCGTGATAGAATCAGCTGTATTGATCAAGGATCATGTGGGTGGTTCAG TTACAACGGGTGATAATCATTCCAATTCTGATGCAATGGATATTGATTCGATTTCTGAGACGGATGCCAATGGCATTGAAGATAGTGTCAATAAAAAGTG TGAATCTCCACGTAGTTCTGCTGATGGTACAAGAAAAGATAAAGCTAACAGACGGCTTGATGTGCCAGTGAGTGTGAATATATATGGTGGAATGACAGAG GCAGAGATCTTAGAAGCTCATGAGAAAGAACTCCAGTTGGCCCAACAAGACAAAACTGTGGAGCTAACTAAAGACAAGAAAAATAGCTTGGAATCTTATG TCTATGAGACGAGGAATAAGCTCTCCAGCACGTATCGGAGCTTCGCAAGTGAGCAAGAGAAGGATGACATTTCTAGGAGCCTGCTAGAGACTGAAGAGTG GCTTTATGAGGATGGTGATGATGAAACTGAGCTTGCTTATTCTTCAAAACTGGAAGATCTGAAGAAGCTGGTGGATCCAATCGAGAATCGGTATAAAGAT GAAGAAGGAAGAACACAAGCTACAAGAGATTTGTTGAAGTGCATTTCAGATCATCACACATTTGCAGATTCTTTTCCACCTCAGGATAAAGAACAAGTCA TCAATGAGTGCAATAAAGCAGAGCAGTGGATAAAAGAGAAGTTGCAGCAACAAGATTCTGTTCCCAAGAACACTGACCCAATCTTATGGTCAAGTGATAT TAAGAACAAGACAGAAGAATTAAACTCAATATGCCAACAGATATTGGGATCCAGGGATTCTCCAATTTCAGAAGACAATTATGAAGATAAGCAGGACACT TCAAATCATCCCTGAATATATTGATTTTGGTGATACGTTATGAGCTGAATGACTTATATGTTTTCATTACTAATATATACACTGACAAATATAGAAATTT TTAAGTGCCATTTTCTTTATTTTATTTCTATCTTTCCCCCCTTGGTTTGAAGATTTGAAAGAGGTAAATCTAATTAGATGAAACAGTGAGGATCAGTGCA ATCAATGTTTTTCCAAGGTTTCTTGTTTTGTGTATTTTGATATCTTATGTAATGTGAAATACTTTATTCAAATGAATAAAATAGATTCTGCTATAGGGGA GAAAAATGTGTGAATCATTTATATGTAATATTAGTGGCACTTGTTTCTGCATTGTGCTTGAGGATATCATTAGTATTTGGAGTATAGTAGTATAGTGAGG CTTGTAACATAGAACTTGTTGCTCAACTTTATGACATTAGATTGTTATTAAGATTGTGCCCATGCAATGCATGGTGACTAGTTAAT
• Tissue: pods
• Gene name: LI_gene_172645;
• Additional information: details;

Expression of Ll_transcript_342480

FPKM

• PAB: 4.9
• PNAB: 11.4
• PS1: 13.7
• PS2: 11.3
• PS3: 14.2
• PW1: 12.6
• PW2: 14.8
• PW3: 16.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342480

• Blastp: Heat shock 70 kDa protein 16 from Arabidopsis with 59.58% of identity
• Blastx: Heat shock 70 kDa protein 16 from Arabidopsis with 59.58% of identity
• Eggnog: Heat shock protein(COG0443)
• Kegg: Link to kegg annotations (AT1G11660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425878.1)
• Pfam: Hsp70 protein (PF00012.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;