Ll_transcript_342484

• Id Trinity: TRINITY_DN49842_c0_g2_i4
• Name Transcript: Ll_transcript_342484
• Sequence: GGTTTTGTTCATTTAGCACTGCAAACACGCCTTCCGATTGTCCCAATAGTCATGACAGGTACTCATCTAGCATGGAGGAACGGAAGCTTACATGTTCGGC CAGCACCTCTCGCCGTCAAGTATCTCCCTCCGGTAAGTACCGAAAATTGGAAGGTTAACAAGGTTGATGACTATGTCAAGTTGTTGCATAACTTGTATAC CGAACACCTTCCTGAGATTCAGAGGCCTCTGCATTGAAAAATTCCGGAGTCAGCACTAATTCATAGCTGAGGAAATATTAATTAACGGGAAACTGGGTTA CTCTTTATCTTAGCTATCAGTTCTAAGATTTTGTCTCTCTATCTTCACAACGTGAATATGCAATCCTAACATTCCACCATTCTTCATTTCTTCTTTCTCT CTAAACCAATTCAGCCCTTTTGGTTTTGTTTGTAGTAACAGCACTGGTTGAAGCTAAGGTTTCTGAGACTGCTCTGTGGAATTTCATAAAGTTCGAATTT TGGATTGTGGGTTAAGTACATTGAGTGAATTAGATTGATTTAGTTGTTTAGAGTTTAGTGAAGGGATATAGTGAGTTCAAATGAGTGTTGTGGGTTTTGA CATTGGAAATGAGAATTGTGTCATTGCTGTAGTGAAACAACGTGGGGTTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTTTGC TTTGGAGAAAAGCAACGTTTTTTGGGGTCGGCCGGTGCTGCTTCTGCTATGATGCATCCCAAGCCCACAATATCTCAAGTGAAGAGACTGATAGGCAGGA AATTTTCGGACCCTGAGGTTCAAAATGAGTTGAAAATGCTTCCAGTTGAAACCTCTGAAAGCCTGGATGGTGGCATTTTGATTCACTTGAAATACTTGAA GGAGACTCATACATTTACTCCGGTTCAAATACTAGCAATGCTATTTTCTCACTTGAAGACTACAGCTGAAAAGGATTTGGGGACCGCAGTTACAGATTGT GTTATTGGAATTCCATCATACTTTACTGACTTGCAAAGACGGGGATATCTTAATGCAGCATCGATTGTTGGGTTGAAGCCTTTGAGATTGATTCATGATT GTACTGCAATTGGTCTTGGTTATGGAATTTACAAAACAGATTTTCCCAGCAAGGTTCTAGTTGTTGCATTTATTGATATAGGACAGTGTGATACTCAGGT GTCTATTGCAGCATTTCAGGCTGGGAAAATGAAGATACTTTCACATGCTTTTGACAGGAGCTTAGGGGGGAGAGACTTTGATGAGCTTCTATTCTGTCAT TTTGCAGCAAAATTCAAGGAACAGTATAGCATTGATGTGTATTGTAGTGCCAAGGCATGCACTAGGCTGCGTGCAGCATGTGAGAAGTTGAAGAAAGTTT TGAGTGCAAACTCACAGGCACATCTGAATATTGAGTGTCTGGTGGATGAAAAAGACGTTAAAGGCATTATCAAGAGGGAAGAATTTGAGAATCTGGCATC AGGACTATTGGAGAGAATATGTATTTCTTGCAACAAGGCTCTAGCTGATGCAGGCTTGACTGCAGAAAAGATTAACTCTGTTGAGCTTGTTGGTTCAGGC TCAAGGATTCCTGCGATATCTAGATTATTAACTTCTCTATTCAAGAGAGAACCGAGCCGAACGCTGAATGCAAGTGAATGTGTAGGTCGTGGTTGTGCTC TGCAGTGTGCAATGCTTAGTCCTGTTTTCCGTGTCAAAGAATATGAGGTCCAGGATTCTATCCCTTTTTCTATTGGACTTTCATCTGATGAAAGTCCAAT TTGTGCAGGATCTAATGGTGTAATTTTCCCTAAAGGACAACCCATTCCAAGTGTTAAAACCTTAACATTTCAGTGCAGAAATTTTCTCCATTTGGAAGCA TTCTATGCCAATCCGAATGAACTACCACCTGGAACATCTCCTAAAATTAGTAGGTTCACGGTATGCTTACTTTAGAATTTTCTGATATTGTGAAGGAGTT TAGATCAACATCTTGTGCACATTTCTATGTGATTTACACCCCCGTCCTTTCCTTATCACTCCCCCCTCTCCATGATTTTTATGCAGAATTTTAGTTCTAC AGAAAAAGAAATTTATTAGTAGAAAGTAGTCATGAATTCATGATATCAAGCACTAGCTTTCACTTCTTATCTAGCATATCCTCTGATCTAGGTTCCTCTT CTTATCCACCACCATTCGATGTTTTTTATGCAGCGAGTGATGTTTAATGTACAGAAAAAGAAACTTATTGGTAGAAAGTAGTCATGATAGCGAGCAGCAG CTTTCACTTCTTATCCAGTACCATACTCTTATCTAGGTTTCTCAAATAGAGAGAAATAGAAATCTCTATTATCTAGGTTTTACGGATGATTAACATATGC TAATTTACATTATGTCTTAGAAGACAACTAGATATCACAGGACAATAATGTTATAGCTCGAGATATTGCCATCCCTTGTGATAGTGATTAAGAAAGTGCA ATTTGTTATACGTGCCCACACCTAGTTGTGTATCATATGAATGTTCGCTAATTCTATGTCTACTCAGATTGGTCCTTTCCATGGACCCGATAGTAGATCC GATAGTAGTATGACGGAAGCTAAAGTTCGTGTTCAACTAAATTTGCATGGCGTTGTCTGTATTGAATCAGCTACAGTAAGTAAGAACTCTCATTTTTATC TCTCAACATTGTGGTATTGTTTTGTGAGAGATCTTGCTATGCACTTCAACCATTTTATGCCTTCAGCTGATCGAAGGTCATGTGGATGATTCAGTTGCAG CAGGTGATCATCATTCAAATTTTGAAGCAATGGATGTTGAACACAATTCTGAGACAGTTGGGAATGCTACTGAAGATTGTGTTAATAGAAAGTGTGGATC TCCACGTTCTTCTGTTGATGGTAAAAGAAAATATAAAGCTAACAGAAGGCTTCATGTAGAAGTGAGTGAGAATATTTACGGCGGAATGACTAAGGATGAG ATATTGGAAGCTCGTGAAAAAGAACTACAGTTGACTCAGCACGATAGAACAATGGAGCTAACTAAAGACAAGAAGAATTCCTTGGAGGCTTATGTCTATG AAATGAGGCCTAAGCTCTTCAACACGTATCGGAACTATGCGAGTGAGCAAGAGAGGGATGGTATATCCAGGGGCCTGCAAGAGACCGAGGAGTGGCTTTA TGATGACGGTGAAGATGAAACCCTACATGCATATTCTGCTAAACTAGAAGATCTAAAACAGCTGGTAGGTCCAATTGAGAATAGGTATAAAGATGAAGAA GCAAGAGCCCAAGCTACAAGAGATTTATTAAGTTCCATTGTAGAGCATCGCATGTCGGCAGGTTCCGTTCCACTCCAAAATAAAGAACAGATCATCGATG AGTGCAATAAAGCAGAGCAGTGGCTAATAGAGAAGACGCAGCAACAAGATTCTTTGCCAAAGTGTTCTGACCCAGTATTTTGGTCAAGTGATATCCAGAG CAAGACAGAGGAGTTAAACATGGTGTGCCAACAAATACTGGGATCTAAGGGTTCTCCAACTTCACAACGCGTGCATAATACTTCTGATCATCAATGAACT TAACCATGATGTGATCATCATCTGGCCAGTGTAGTTTTTTCTTTTAACTTCTGTTTTGGAAAATGATTCTTGAGCATCAAAATTTATGATGCCCTTTTTT GATGCATTTTTGGAGAAGAAGAAAAGTCAAAGTTAGAGATATGTATGCTATATTTGCCCAATCATTTTGTTCTTCTAAAGGCACCCGGCGTTTTTGTCTT ACTAACACTATTCCCTTATGTCATGCAATTCCCTTGAGACAAATATGC
• Tissue: pods
• Gene name: LI_gene_172646;
• Additional information: details;

Expression of Ll_transcript_342484

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.4
• PS2: 0.7
• PS3: 0.8
• PW1: 0
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342484

• Blastp: Heat shock 70 kDa protein 16 from Arabidopsis with 68.25% of identity
• Blastx: Heat shock 70 kDa protein 16 from Arabidopsis with 68.25% of identity
• Eggnog: Heat shock protein(COG0443)
• Kegg: Link to kegg annotations (AT1G11660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455969.1)
• Pfam: Hsp70 protein (PF00012.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;