Ll_transcript_341303

• Id Trinity: TRINITY_DN49846_c1_g1_i12
• Name Transcript: Ll_transcript_341303
• Sequence: CTGTGACCGAGAATGTGACCACTGACCAGCATCGTTGTGCCTCTCTACTTGTCCTATGGAACACTTGTCTCCTACTTATTCCTTTATCTTTTCAACCTCT CTCTCTCTCTCTCCTCAGAGGCTGAAAGACCAAAAGAAAACACAGAAAACAAACCCTATATCCCTCAAACCCTTCTCTTATCTTCACCCCATTCCCACCC TTTCACTTCAAACCTTCACCCCCTTGCAGGCATTGTACCCTCTTGTTTCAGTTAATCTCCTCCTTTCCTTTTTGACCCATCATTGCAAACAAAGAACAAA AAAAGAATCTCATTTCACTCTCTTCTGGTTTCTCCAAAAATAGCCCATGTACTAAAATCTGAAAAAGTTCACTTTTTTCATCTCTGCTTCCAAGTTTTCC TTCTGGGGTGGCCAACATTCTCTACACAAAAATCTCAGTTAAAAGTTGATACCTTTGCTGCAATGCCAAATCAAAAACCCATTTCACAAACCACCTTGTT CCTCTTCCTTTCACTGTTTCTTCTCATAAATGTAGCTCAAGTAGCCTCAAAATCCACCATAGAACCATGCACAAACTCAGACTCATGCAATGCACTTCTT GGCTACACTCTCTATACTGACCTTAAAGTCTCTGAGGTAGCTTCTCTTTTCCAAATAGACCCCATTTCTCTACTCACAGCCAATTCCATAGACATATCCT TCCCTGATATTGAACACCACATTCTCCCTTCAAAACTATTCCTCAAGATCCCTATTTCATGTTCCTGTGTGGATGGCATTCGCAAATCAGTGACCACACA ATACAAAACTAGGCCTTCGGATAGTCTTTCGTCGATTGCGGATTCGGTTTATGGAGGTCTTGTATCTGCTGACCAGCTCAGGGAGGCTAATTCTATAATT GACTCTTCTGTGCTTGATGTTGGGCAGAACCTTGTTGTGCCTTTGCCTTGTACTTGCTTCAATGGCACTGATAATTCTTTGCCTGCAATTTATTTGTCAT ATGTGGTTAAACAGGTTGATAGTTTGGCTGCAATTGCGGCTAAGTATTTCACAACTCTTACTGATTTGATGAATGTCAATGCCTTAGGAAGCACTGCCAT TGATGATGGTGATATTCTTGCTATTCCAATACCAGCTTGCGCTTCAAATTTTCCAAGATATGCCTCTGATTATGGGTTGCTTGTCCCTAATGGAAGTTAT GCCATTACAGCAGGCCACTGTGTGCAGTGTAGTTGTGGACCACGAAACCTGAATTTGTATTGCATGCCATCTTCTCTGGCTGCTTCATGTTCCAGCATGC AATGTAAAAAGAGCAATCTTATTATTGGGAATGTTACAGTGCAACAGACTGGTGGTGGTTGCAATGTTACCTCTTGCTATTATGATGGTATTGCTAATGG CACCATAATAACAACGTTGTCCCCGTCTCTTCAGCCTCGATGCCCAGGTCAGAGTGCAGCAGCCGCTTATATATTTAGATTCCAAATGCATTGTAGAACT GCATTGTTCGCTTTCTAATCACCGCGTTCCACTATAACGAGAGCAATTCTGTATCCACCCAAAAGTCATTGCTCACATCCAGACGGATGGTCCATCTGTT CTAAGTATCATACTACCGGTCTGGCTATTTTATTTACAGCCTTTACACTGACAGATGGTCCATCCGGTTGGGTCCGAGCAGTGATTTCTTGGGTGTTGAT AGGATTGCCCTTATAATGATTATAATTTTAGATGTGTTTTTTTATTGTTTTCCCTTTGGGTGATTTATTTGCTTAGATTATGTGGCATATTCAGTACTAT TAGTTCTTCTCTTCAACTACTTGGAAATGCTTTAATTCTGAATATATGGTACATTGAATGTCTGAAATCTAAATATATTGAGATGTACAAAGTACAAAAA AATGAACTATCTTCAGTCTTCATAATTGTCTATATTCTATCTCTGATGAAAGTTACTGCACAATGCATATGAACAAAAAGTGTAAACTCTAGACTCTTGT TGCAGAAAATAGAGTGGGTTAGATCCAGTATCATGCAGCATCCTAATCTTGATTAAAGTCATAGCAGGAAAAATAGCAACCTGTATTAAAGTCATAATTT CTGAAATGCATTCTGAATATATTAAAATGGTGCTGCAGGACCACAAGAATTCCCGGATCTTATAGCCCCGCCTACAACTGTTACGAGCGAATCAATATTT GCACCAGCGCCAGCACCTCAGTCAGATGGAAATGGTCTAACAACACCCAAATCCTCGGTGGTACCTTCGACGGGGTCATTTCCAGGATTCTCACCTGCAA ACGGCCCTATTAGTGGGATAGCGTCTGGGGCCTCTGCTGCTTGCTCCTTGGTGAATCCATTGCCTGCCACTTTGACATCTGCACTTTTGTTATTACTTGT CAAGTTGATGCTCCCGGAAGCATTGTAATCCTCTCAATTTCCTTGTGGATCTGGTTCTGCCCTGTTACTTTGTGACAGATGGTTCTATCTATTTATTTGT ACTCTTGAACTGAACTGATTTGTGAGTGTGGAAATTTCGAGATTGTCGGATAATTTTCATTGTTATGATTTTAATGTTACGTCATTGTCTAGAAGCAACT CGAGCAAACCTTGTCTAGTGGGAGCAAAGCTCAATTTGTTTATGTTATTGTGTACCCTGACCACGGATAAGTAATTTGATGAATATTATGAAATACCGAG CATCTATCTCTCTAGCATGGTCCAGTTTAGGTATGCAACCTAGTGCAAATGTTATCCAGAACTTCCTATATGGAAATGGTTGTTTTCTATTAGTTCTATT CCTTTTTGGTGTTTCATGTCAATATTATAATAGGTGATGGAAGTGTTTGAGAATGTGCC
• Tissue: pods
• Gene name: LI_gene_172668;
• Additional information: details;

Expression of Ll_transcript_341303

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0.3
• PS3: 0.5
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341303

• Blastp: LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 68.1% of identity
• Blastx: LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 68.64% of identity
• Eggnog: lysM domain-containing GPI-anchored protein(ENOG410YAMN)
• Kegg: Link to kegg annotations (AT1G21880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438572.1)
• Pfam: LysM domain (PF01476.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;