| Id Trinity | TRINITY_DN49846_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_341299 |
| Sequence | CTGTGACCGAGAATGTGACCACTGACCAGCATCGTTGTGCCTCTCTACTTGTCCTATGGAACACTTGTCTCCTACTTATTCCTTTATCTTTTCAACCTCT CTCTCTCTCTCTCCTCAGAGGCTGAAAGACCAAAAGAAAACACAGAAAACAAACCCTATATCCCTCAAACCCTTCTCTTATCTTCACCCCATTCCCACCC TTTCACTTCAAACCTTCACCCCCTTGCAGGCATTGTACCCTCTTGTTTCAGTTAATCTCCTCCTTTCCTTTTTGACCCATCATTGCAAACAAAGAACAAA AAAAGAATCTCATTTCACTCTCTTCTGGTTTCTCCAAAAATAGCCCATGTACTAAAATCTGAAAAAGTTCACTTTTTTCATCTCTGCTTCCAAGTTTTCC TTCTGGGGTGGCCAACATTCTCTACACAAAAATCTCAGTTAAAAGTTGATACCTTTGCTGCAATGCCAAATCAAAAACCCATTTCACAAACCACCTTGTT CCTCTTCCTTTCACTGTTTCTTCTCATAAATGTAGCTCAAGTAGCCTCAAAATCCACCATAGAACCATGCTCAAACTCAGACTCATGCAATGCACTCCTA GGCTACACTCTCTACACTGATCTTAAAGTCTCTGAGGTAGCTTCCCTCTTCCAAATCGACCCAATTTCTCTCCTAACAGCCAATGCCATAGACATCTCTT ACCCTGATGTGGAACACCACATCCTCCCTTCAAGACTCTTCCTCAAGATCCCAATCTCTTGCTCTTGTGTTGATGGCATTCGAAAATCGGTTTCCACACA TTACAAGATTCGCCCTTCGGACAGTCTTTCGTTCATTGCGGATTCAGTCTATGGAGGTCTTGTATCTGATGACCAGCTCAGGGAAGCTAATTCTATTACT GACCCTTCTGTGCTTGATGTTGGGCAGAGCCTTGTTGTGCCACTTCCTTGTACTTGCTTCAATGGCAGTGATAATTCGTTGCCCGCGATTTATTTGTCAT ATGTGGTGAAACAGGTTGATAGTTTGGGTGCAATTGCAGCTAGGTATTTCACCACACTTACTGATTTGATGAATGTTAATGCCTTGGGGAGTACTGCTAT TGCTGATGGTGATATACTTGCTATTCCAATACCAGCTTGCTCTTCAAATTTTCCAAAATATGCCTCTGATTATGGTTTGCTTGTCCCCAATGGAAGTTAT GCCATTACAGCAGGCCATTGTGTGCAGTGTAGCTGTGGACCACGAAACCTGAATTTGTATTGTATGCCAGCTTCTCTGGCTGTTTCATGCTCCAGCATGC AATGTAAAAACAGCAATCTTATGCTTGGGAATGTTACGGTGCAACAGACTGGTGGAGGTTGCAATGTTACTTCTTGCAATTATGATGGTATTGCTAACGG CACCATAATAACAACGTTGTCCCCGACTCTTCAGCCCCGATGCCCAGGACCACAAGCATTCCCTGATCTTATAGCTCCACCTACAACTGTTACGAGAGAT CCGATATTTGCGCCAGCACCGGCACCTCAATCACATGGAAGTGGTCTAACAACACCCAAATCCTCGGTGGTACCTTCAATAGGATCATTTCCAGGATTCT CACCAGCAAATGGTCCTATTAGTGGGATTGCTTCCGGTGCTTCTGCCGCTTGCTCCTTCATGAATCCATTGCCTGCCACTTTAGCATCTGCACTTTTGCT GTTGTTTGTCAAGTTGATGCTCCCGGAAGCATTGTAATCTTTTCAATTTTGTTGTCGATCTGGTTCTACCCTGTTACTTTGTTGTCACAGGTGCTTCTAT CTATTTATTTGTACTCTTGAATTGAACTAACTTTGAATCTGAAAACTACCGGATTTTGGGTCTCATCACATGTTTAGCCTTTTATATAGTATTTGGTGCT TTACTGTGCTATGTTTGTTCTTGGAATATTCTGTTATCAATCATTACTAATGCTGTAAGAATTTGATGGTGATGTCTTTGTAGACACTTGTAATTATGTA TGTTTCTTTGTCTTACTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172668; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341299
| Blastp | LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 68% of identity |
|---|---|
| Blastx | LysM domain-containing GPI-anchored protein 1 from Arabidopsis with 72.98% of identity |
| Eggnog | lysM domain-containing GPI-anchored protein(ENOG410YAMN) |
| Kegg | Link to kegg annotations (AT1G21880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417576.1) |
| Pfam | LysM domain (PF01476.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |