Id Trinity | TRINITY_DN49851_c0_g1_i10 |
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Name Transcript | Ll_transcript_342597 |
Sequence | AAAAATATAAGAGAAAAAGAAAAACCCAAGGGAAAGACATGCTATGAAAATTGAAACACAATGGCACATGCTTCATCTTGAGCATCCATTCTTTGTACTT CTTTTTACTGACTAATAAAAGTTGAAAGCAACCAACAGCCTGTCCTTATTACATATATCTTATTTCTTTCCATTCTCAACCTATACATACCCTGATGAAG CCCTATATTTGGTAAAACACAATTTTTCAATATATTAAAATATTCACTTCAACTTCTTAAAGGGAGCATATCAACTAGACCCTTTATTCAGTTCCATTGC TATTCTTCTCTCTCTCACTCTTTCTGCCCTCTCTGAGTTTTATGTTCAGTTTTCAATACATTATCCTTACTACTGTCTGCAATACACAATTTCATATCCT TAGGTGGCTAACAAGGAAGTGCTTGTGAAAGGAAGAACTAAGCACTGCAACTGTTTTCAAGGTGAACAAACAAACATAAGAGGGAGTTTTTGTGGAACTA GAGCTGAAAAGAGTGGGAAAGTCTTTTATTATGGACTGGAATTTGAAATCACCTTCTTTGGATTTGACTGAAGTGGATCAGGCATCAACTTTTCCCAACA TGGAAACAATGGATGAAGGGTCAAGCAGGTTTGGAGTTTACAGCACAAAAGGGGAGTTTTCTGTGGACTTGAAGCTTGGTCAAGTTGGGAATTTTGGCAC AGAATCAATGTTGTCCAAGCCCAAAGGTGCTGCTTCTGATGCTGGACTTTCCAAAATGGCATCAACCTTAGCTTCAGGATCATCTAAAAGAGCTAGAGCC TTCAACAATGGGAATCACACAGTGACATGCCTTGTGGATGGGTGCAATTCAGATCTTAGTAATTGCAGGGACTATCATAGGCGCCATAAGGTGTGTGAAC TTCATTCCAAGACTCCACAGGTCACTATTGGTGGCCAGAAGCAAAGGTTCTGCCAACAGTGTAGCAGGTTCCACTCACTGGAGGAATTTGATGAAGGAAA AAGAAGCTGCAGAAAACGCTTAGATGGACACAACCGAAGGAGAAGAAAGCCCCAACCAGAACCACTCACGCGTTCTAGTAATTTTTTGTCCAATTACCAA GGTTAGCTTCCAGTTCCTAGCTACCATTATCTTTAGTGGACCCATGTGTGCCTAGATTTGGAGCATACATCTGCTAAAGATCCCACATAGGTACATAAAT ATTAAAAGGGTAAGATATAACACAATTACATAATGCACTCACCTAGTTGAGTCCTCTGCCACCATCCCTTATTTGGGCCATTGATGCCCACACTCTTTTG ACAATCTAGTGGCCACTAAAATAGCATGTTAGCACACTAAAGAAAAAATAAAGGCTTTTGCTTTTAAGAGAGTGAAACAAGCTAGTCTATTATCTGTAAG TAGTTTATCTATTAATGAAATATAATGTGTGACGCCTTGAGTTTCTTAGTTTGGACATAATTCCTTCACAATAGACACATATAATGGTACCTTAAAGACA AAGTGTGGGGGAGCCAAAACTAAACCTTTATAAATATTTTTTTAAAGCAACCTATGATTAGTCAGTTTTTATGCAATTATCATTTTATAACTTGTGACTA CAATGATAATTTCATAAAACCAAAGGAGTAACATGAAGACTATGCCTTCATAAATCCAGGGATTAAAATGGTACTTTAGCCTTTAGTCTATATACTGAAT AATCCATAATTCCCAAACTGTCTATCAGACAATTGTTTGGAGGAATTATTAGGTGGTATGAGATCAATATTCCCAAACACATCTAATCTAGACATGTCTA AACTTTAATGTTGCACATGAAATTCAATGTCTAAAACTATACTAGTACTTTTTTCAGGAACCCAGTTGCTACCCTTCTCAGGTTCACAAATATACTCTTC CAATACTATGGTGAATCCTGGTTGGAGTGGAGGAGTTGTTACTTCATGTGCAGATGTTAGACTCCACAGCCACCACCAACACCAACAACAGCAAGTGAAT TTCATTGACAAACAAGACCTTTTTCTTGGATCTTCTCCAATCAGCTACAAAGAAGGGAAGCAACTGGCATACTTACAAGGTGATCACAATCCCACTGTCA CACTCAACAACCAAAACACACATCATCTTCAGACACTTCTCAGGACTAACCCTTACTCAGAAAGTAGTGGAGGGTTGAGATGCAAAATGTTCTGTGATGA TAGCCTAACAAGTTCTGTTCATGACTCTCCTTGTGCTCTCTCTCTTCTGTCATCACCACAGACACACAATAATTCTGGAAATGGATTGAACCAAATGGTG CAGCCTCACTCAGCATCACTTATGCAACCCTTAGGCCTGAGTCTGCATGATAATAATAGCTTGGAGCCTGTGGACTCAGTTTTGGATCCTAATGGGAGTG ACCATTGTTCCTCAATGTATAACATTGGCTCTAATGGATCACAGGGGATTAATGCTCCTCAACTATTTCCATTTCAATGGGAATAGAGACTTTTAGGATT ATGACTCATCTTTTTGGTTGCTGGTTTAGAATGAACTCTTTCCCTCAGATTATTTAAATTATCATTTTAGCTTTCATGGAGACAATGATCTATCACCTAA AAAGAAAAAAAACTGATTTTTTTTCATGTCAAAGGTGATGGGTTGTTTTAACCCTGCACTATCCACTATTTGTTGCACCATATTTCAATATGTAAAGGGG GTACTACATCATTTCTGTCGCATGATAATTCATAAGTGCCTACTTTTGTGAAAAAATCTTATTTGTAATTATTACATGCAAATTGTGATAATCTTGTAGA GAGTCAAGCTATCTCTTCAAAAATAGAAGTTATTAG BLAST |
Tissue | pods |
Gene name | LI_gene_172711; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342597
Blastp | Squamosa promoter-binding-like protein 13B from Arabidopsis with 55.33% of identity |
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Blastx | Squamosa promoter-binding-like protein 13B from Arabidopsis with 55.33% of identity |
Eggnog | Squamosa promoter-binding-like protein(ENOG410YD0Z) |
Kegg | Link to kegg annotations (AT5G50570) |
CantataDB | - |
Mirbase | bdi-MIR156j (MI0029151) |
Ncbi protein | Link to NCBI protein (XP_019464709.1) |
Pfam | SBP domain (PF03110.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |