Ll_transcript_342588

• Id Trinity: TRINITY_DN49851_c0_g1_i5
• Name Transcript: Ll_transcript_342588
• Sequence: CTTATTTGTTACAACTTACAAGTATTTTTATCATAATTTTCCTAATAAAAACATACCAAAAGAAAATAAAAACCCAAGTAAAAGACATGCTATGAAATGT GAAACACAATCCCACATGCCTTGTCTTGAGCAATATCCATTCTTTGTACTTCTTTTTACTGACTAATAAAAGTTGAAATCAACCAACAGCCTGTCATTGT TACCTATATCTCCTTTCCTTTCTCAAGCTATACATACCAAGATGAACCACTATATTTGGTAAAACAAAACTTTTTACTTTATTAAAATATTTCACTTTCA ACTTCTTAAATGGATCATATCAACTAGGCCCTTTATTGAGTTTCATTGCTCTAGTTCTCACTCTCTCACTCTTTCTGTCTTCCCTGAGTTTTATGTTCAG CTTTCACTACATTATTCATATTCTTAGGTGGCTAACAAGGTATGTTTTATGTGGTTTGCGGAAGATTTCTTCTTTACATAACATAAAATCTTCTATCAAG GAAAAAAATCTAGCTCATTTATTTAGCTATCCACTTTATTTGGTATTAATATTCATTGAACCTATGGCATGTAGTGGTTTCAAGTAGCATACTTATTTAT TAATTTTTATGCATTTAGTTCCTTCATTATTTTTTGTTGGTAACCTTTGAGTGTAACTTCCTGTTTCCTTGGAATTACAACTTGACCTTCTGCTAGGTAG TTAGTTACTCATTAATTATGTATACTTAACCATATGATGCAGGATTGTTACTTTTTATTTTCTCCAAAAACAGGTACAAAAATATGTCTTGTGTTGTGTT GTATAGTAATAATTGACTATTTCTGTCTCTCTAGTTTTTCATAATTTCTATCAGTTGTCACTTTAAGACTTCGGAGTTTGGTTGTTGCCCTGAAATAAGA TAAAGCTATGCTTTCTTTAGTGCCTTTAATTGAAGTTTGGTTCAACTTCTTTTTCTATTAATGTCTAGTCTTGCTCACAGCTTTAATTTCCTATTATTGC TTTTTCATGCAATTGAGAAGGGTGAAACTGTGAACAAAACAAGAGGGAGTTTCTGAGGCACAAGTGCTGAAAAGTGTGTAAAGTCTTGTATTATGGACTG GAATTTGAAGTCACCTTCTTTGGATTTAACTGAAGTGGATCAAGGAACAACTTTTCCAAACATGGAAACAGTGGATGAAGGGTCAAGCAGGTTTGGTGTT TATAGAACAAAAAGTGATTTTTCTGTGGACTTGAAACTTGGCCAAGTTGGAAATTTTGGCATAGAATCAGTGATGGCTAAGCCCAAAGATACTTATGCTG CTGCTGGAGTATCAAAAATGTTATCTTCACCTTCAGGGTCATCTAAGAGAGCTAGAGCCTTTAACAATGGGAATCACATAGTGACATGCCTTGTAGATGA GTGCAAATCAGATCTTAGTAACTGCAGGGACTATCATAGGCGCCATAAGGTTTGTGAGCTTCATTCCAAGTCTCCACAGGTCACAATTAGTGGCCAGAAG CAAAGGTTCTGCCAACAGTGTAGCAGGTTCCACTCACTGGAGGAATTTGATGAAGGAAAAAGAAGCTGCAGAAAACGCTTAGATGGACACAACCGAAGGA GAAGAAAGCCCCAACCAGAACCACTCACGCGTTCTAGTAGTTTTTTGTCCAATTACCAAGGAACCCAGTTGCTACCCTTCTCAGGTTCACAAATATACTC TTCCAATACTATGGTGAATCCTGGTTGGAGTGGAGGAGTTGTTACTTCATGTGCAGATGTTAGACTCCACAGCCACCACCAACACCAACAACAGCAAGTG AATTTCATTGACAAACAAGACCTTTTTCTTGGATCTTCTCCAATCAGCTACAAAGAAGGGAAGCAACTGGCATACTTACAAGGTGATCACAATCCCACTG TCACACTCAACAACCAAAACACACATCATCTTCAGACACTTCTCAGGACTAACCCTTACTCAGAAAGTAGTGGAGGGTTGAGATGCAAAATGTTCTGTGA TGATAGCCTAACAAGTTCTGTTCATGACTCTCCTTGTGCTCTCTCTCTTCTGTCATCACCACAGACACACAATAATTCTGGAAATGGATTGAACCAAATG GTGCAGCCTCACTCAGCATCACTTATGCAACCCTTAGGCCTGAGTCTGCATGATAATAATAGCTTGGAGCCTGTGGACTCAGTTTTGGATCCTAATGGGA GTGACCATTGTTCATCAATGTATAACATTGGCTCTAATGGATCCCAGGGGAGTGATGTTCCTCAACTATTTCCCTTTCAATGGGAATAGAGAATTTTATG ATTAGGACTCATCCTTTTGGTTGCTGATTTAGAATGAATTCTTTCCCTCAGACTATTTAAACTATCATTTTATCTTTCATGAAGGCAATGCTTTATCACA TAAAAAGAAAAACCTTGTGTGGTTTTTTTTCCATGTCAAAACTGAAGGGGTTGTTGTCCTGCACTATCCACTATTTATTGCACCATTTATCAGTATTTGA AGGAGGGATTTGAAGCCAGTGACTTCATCATGATCAATTTAATCAACTTGGATAGTTAAATAAATAATGTAAGCTTGATATTTAAATAATATTAAATTGG AATCAAAACAGAATTTAAAATTGAAGTTCTCAGGTTAATGAAAATGTAAAT
• Tissue: pods
• Gene name: LI_gene_172711;
• Additional information: details;

Expression of Ll_transcript_342588

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0
• PS2: 0.2
• PS3: 0
• PW1: 0.8
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342588

• Blastp: Squamosa promoter-binding-like protein 13B from Arabidopsis with 40.88% of identity
• Blastx: Squamosa promoter-binding-like protein 13B from Arabidopsis with 40.05% of identity
• Eggnog: Squamosa promoter-binding-like protein(ENOG410YD0Z)
• Kegg: Link to kegg annotations (AT5G50570)
• CantataDB: -
• Mirbase: bdi-MIR156j (MI0029151)
• Ncbi protein: Link to NCBI protein (XP_019464709.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;