| Id Trinity | TRINITY_DN49851_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_342586 |
| Sequence | GATAATTTTGATAGTTTGAAGTTGTTGTGTTATAGCAATGGAGTGAGGAAATTGATTGCAGAAGTGAGTTAGCTGCACTTACTCAACGATAGTGGGAAAT GAGTAAAAAGCTTTCCGCTTTCATTGTCTCTCTCCAAATATAGAAACCCACTTTCACAAAACCTCTTTCAATTTCTATCAACCCTCTCTTTTCCTTTCTC TTTCTTTCACTATACTAATATCTCTTCTTTTTCCATCCACTGCTTAACCTGACTTAATACTCTTCACATTTACCATTTTAATCACTTTTTTCCTCACTCT CTCTTTATTTTAATCACTTTTTTCTGACTCAATTAAAGTGGAATTGTTTGGCTTCTACTTTGTTTTGAACTCTGATTTTGTTGAATTTCATGTAATGGAA TCTTGGATTTATGTTTCTGAAGAAAAAGGGTATGGCTCAAATGACACACTCTCCCCACCTAATACCGTTGGGAGGAGTAAAAGTTCAATCTTGGGATGGG AACTGAAAACCCCATGTAGCTTTTCTAATGATTTGTTAGCCTTGGGTCATCAAAACATTGATAACCATCAATGTTTTGAGGATTTGGGGTATCCTGAAAT GTTGGGGAAGAATTTATATGATGATCTGGATGGTGGACATGGTGCTAGAATCACTGCTACTACTGTTATAGCTGCTGTCCCAAATCCATTTTCTGCAAGA GGGGACTGCAATTTCAGGCTTCCGAACTCTATCGGTAGCGATTCGTTCATTGATTTGAAGCTGGGACGATTTGTTGATCATGGGGAAGCAATTGATGCAG CATTTTCCAAAGGAGCACCAATTATGTCATCTTCGGAGTCACCAATACCCTCAAAGCGAGTAAGGGCTTCGGGTTTGCGCTCGCAGACCGTGTACTGCCA AGTCTATGGCTGTAACAAGGATCTCAGTTCCTGTAAGGATTACCACAAGAGGCATAGAGTTTGTGAGGTTCACTCTAAGACTTCCACTGTTATAGTGAAT GGCATTGAGCAAAGGTTTTGTCAGCAATGTAGTAGGTTTCATTTGCTGGCAGAATTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGCCATA ATGAGCGTCGACGAAAACCACAAATGGGTATTAACTCTGGAAGGGCTGGGAGGTTGCTTCAGCCATGTGGTGGTAATAATACACATTCTGAAATTAGATC ATGATATAGCTTTCCTCTCTCCTCAGACTTCTAGTTTAAATTAGGCCCTTCATTTGAGCACATGCATTTGCTTCTGTTCATTCTTCACTGATTAGTTTCA TGTGATTGACTGCAAACAGTGTTGATTGTCCACACTCAATATAGATGCATGCTTTTGAAAAACTGGTTCCCCTTTCAAAGGCTTCCTTTAATATACCCTT ACAAGTTACAATCTCAATGCCTCGTAAAATACGTGTTAAATATTTTTGTTCACTTCTTCATTCAAGTTTCAATTTTGACCCTCGAAATAGTGTATGCATT TGTCAGACAATTAAAATGTTGTGTCAATTCCAATGGCATTACTAACACCTGTCTTCACCCACAAAAGGTTAAAATTAAAGATATTTGCTGATTCTCAAAT ACAGATTCACTCAATAGTGGATATACTTCTGCAACACATGAAGTGTAATCCTATTTTTCCGCTTTGTTTTAAAATATTAACTTCGTTTTCCCAAAAATAG AATTCTTCCACTTGAGCTGGTTCCGTGCTGTTCCTGCCAATTGTGATTTGGATTCTATGGTTCTGTTGTGGATGTAAACCATATTTGACTTAATCTGAGG GGAAACGATTTTCAGTCACCATACATGTATGGCTGAAAGAATTCCTCCCTGTAGGAATTAAGTTATCTCCTTATGAATAATCATTACTTAACGCCTGTAT ACTAACAACCAAGACTCTAATTTTTAGTAAAGAACTTCAATCCCCATTTTTTCTTTTGTAGCACTAACCTTAATTTTTTAGGCCTTTAGCATATATATCT AGCTGCAACCCAAATTATGTCACTGATTGATGGGGGAAATATGAACCAATGTGAGAGTTTCTGTCACGTACTTAAAACTTCTAAAGTGCGTTACAGAATT TCCAAGTTGTTCTCAATATTCAGAAACTGATGTACTAGTCACTAGACATTATGCTTAGAAATGTGACTTAAACTTGTAGGTTTAGGTCCTTAATTGATTA TTGAATCACTTCATTGAATTCTACTAGTTGCTGATTGAAATGTGGTCTATGATTTGTATAATGAGTGATTCCAGGGCACAAGTTTTCTCTTCTGTAGTCA TCTGATATCACTATAATTGTTTGATTTGAACTTTATGAAGACCCTGTGGTTCTTGCAGATAGCAGATTCCAGGGGACCATGCTAACATCAGCATCTTATA TCTGCCCAGATATGCTCCCTAGTCGGGCCATGCCTTCTGAGAAATATGAAATGAGTGGCTTCTGGAGACCTAATAAAGCAGAACATGGGACGGGTTTTAA GCATCTTTCTTCTATACCTAGCTCCAATGGATATTCTCAGTCAAGATCCCTATTTCCTTCATATAACCAAAAACAGTTTCCTTTTCTTCATGAAAATGGC GCTACATCCACTACAGGAAGCATCTTCTGTGACAACAATATCCAATATCCACCTGTCCTTGGGGCCCAAAATTCCGGGTCAAAATCAGTATACCACCAGG ATAGTTCCTTAAGAAGTGAGGACTTCAATGTTTTTGATACAACATCAACTGTTCAAGGACTACCCGGAATTTCAGACTCTTGTGCTCTCTCTCTTCTGTC ATCTCAATCCCAGAACTCATCAAGCCAATCATCTGAAATTCCCTTGTCTCACTCTTTGGTTTTTCCAAACAGCCATAGTCATCACTACAACATTAATCAC GTCTCCGAAAAGGTGGGAATAAGCTCGCTTACTTCTTCAAGCCAGGTGTCAGATAGGTTTCCATCAGAAATGAATCCTGTGGATGGAAACAATCTTAATC CTGTGCTGATACCAGACAATGATGCTGATATTGTAAACTTTGAAATGGCAGATGATATTTTCCAACGTCCAGATTTTCTGAATGTGAAAAACCGTCTTTC TTGTGAAGACGGCACAACTATTGACTTGCTACAACTGTCGTCGCAGCTTCAGCATGTTGAGCACCACAGGCAATCCTTGCAGATGAAGCAAGAAAATGAT TCATTTTGCACTCTCCGAATTACGTAAGGTGGTTTGGAGAGATCTACTTTAGCATTTAGTTGCAGGAAACAAGTTGTGGGGCATGTGACACAGACACAAC TATGGCACAGGGAAGGAGAGAAACTTAAGATGGTGCCATTTCTCATTACTGCTAACTATTTAAAGTAGTTTGGTTTATGTCAGTCACCCACTAAACAAGT TGGGCTTTATCAATCAATATTTATTAGATGGGGACACAATAGCCCCTGTTCTTATTAATGTATGCATCTATCTGGATGTAATAAACAAAAGCCTGTGATG TATCAAAATCTGCTATTCAGGGCATAAATACTTTAAACAAGCACAATTATTTACTATAACCGATGATGTTTTTTATTTTTTATTTAATGAAATATTAATT TGCATAAATACTTTAAACAAGCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_172712; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342586
| Blastp | - |
|---|---|
| Blastx | Squamosa promoter-binding-like protein 6 from Arabidopsis with 64.49% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | mtr-MIR156a (MI0001752) |
| Ncbi protein | Link to NCBI protein (XP_019438972.1) |
| Pfam | - |
| Rfam | - |
| GO | - |