Ll_transcript_341821

• Id Trinity: TRINITY_DN49852_c1_g4_i1
• Name Transcript: Ll_transcript_341821
• Sequence: GTCGCAACATCCACAAGTATGTGGGACTAACTCTCCCAACGGACATTCTTTCCATCACAAGAATAGAACTTGGGTCCTTGCTCAAGGGAAATGCATGTAC CACTTGAACCGGGGCTAACTCTTCCAACTGCATTTTTTTCATCCACAAGGATAGAACCCGGTCCTTGGTCCTTGCTAGCATGTAGCACTTGAACCAATCT AATCTGTGATTAGTATTTATTTAAATGAAATGCAGTTTTTAATAAAGAAAAATAAGAAGAAAAAAGAGAGAAGGAGGAGTAATAATACTAATACACACAT ATTGTTCTTATTTCATTGTCGTGTTTTGGTTTCCATCCCTTGAACAATTAATTACATTTATACCCCTGTTGAATCCCCAGATCCAGATTTCAAACATTGC TTCCTTTCCTTCAACCCAAGGTTTTGTAAATTCTCTTTACTATCTTTTTATATTATACAATTCCTCACCTTCAATTTCAACCAATTCACGCTTTTGTACA ATTACATACAAATCTTTTCCTCTATTTTCGATGCACGGGTTTTCATCACAAAATTGGAACGTTCTGTTTCATTCAACATTATCTTTATTCACACATTTTT TTTAAATGAAACCTATAAAATTAGAGATTATTCGTTTACCCTTTTGTAATGTTCTCAATTTAACCCTCATTTTCCTTTTCCTCCAAGCATATCATGGAAT TGAACTGTGCAAATTTGATGTTAGTGTAGCTTAGAGAGGGTAGGAATAGGAGTGCTACTAATATCTTGTTATAACCTATCATGGGTCTCAGATATTTCAA GCAGTAACCCCTTGTAACATAACAATGTGAAAGGTGCACTTCGGCATTATCTGGGAATTAGATAATGCTGGCTAGTTAACTAAAACTTGAACTTGCGTTG AGTAGAGAGATGGGGATATTGATGTGAAGGTACCTCCATTTCTCAGTGTGTCCTTTATGTTGGGAATGTACATATGATGATGCTGGGTTGCACACTTTCA ATTTCTAGAATGAACTAAACTCTCAAATTGTAGACACGTCTGAGGATCGGGCTGATGCGAACAGGCATAGTTTTATGAAGCAATGGTCATGCAACACTTT CAAGTTCTTTAATTTTTCTGAGGGGAGTGAGAAAACATGAGGCAGTGGCTGGGACCAGGGTTTGAAAATGTGAGATTTTTAGAAGGGTTTTTCGGCTTTA CCTTAGACAATCAACTACCTATGGTTGACTATTAAACTTTTATGTGTGAGTGTCTACATTGTCACCATGACTTCTACCATGAGGTGGGAGAGAGGGATAA TTGGTTCGAAATCTTCTGTGTCTGTATGTTAGGCTTACTAGTTACCAACTATAATCAATAGAAAAATAATATATTTGTACATCCAGTTCTAATATTTTCT TACATTGTTAGTTTGATGACCAGTAATATTTTGTTGAGTTCTGAAATAAATAAGAAAAGGGTCATTTATGAAGGAATCAAATATTATCATGAATTATATT CATCTGCACTCCTTTTGTTGTTATTGCTGCTGTAGACTGTAGTGCTTTTTAAATTATTGGATGGAAAATTGTTGTTTAATTTGTTTTTTAAATGATGCTT TGTACACAACAAACTTTCCTTCATACTTTTTGTGTGTCTTTCTAATTATCACACATTTGAAATGAGCACTTGCACTGTCTGACATTGGCTTTTAATTTCT CAACAATCACAATTTTGTCATAAATTAGTGGATATATATTGTGATTGCAGGTGCACCTTCCATTACAACAGGAAGTCAATTGTGGTGAATTATAGGACAC AGATGAAATAGTGGTTATAAATTTATGATGTCTGGACTGATTGAAGGGCTTCCTGACGCTGTTGCGATTAGGTGCCTTGCACGAGTTCCCTTCTACCTCC ACCCGACGCTGGAGCTTGTCGCTCATTCGTGGCGAGCAGCCGTTCACAGCACTGAGTTATTCAAAGCTCGGCAGGAGGTTGGTTCATCTGAGGATCTGTT ATGCGTCTGTGCTTATGACCCAGAGAATTTATGGCAGCTGTATGACCCTCTTCGAGATCTTTGGATTACGCTGCCTGTTCTTCCCTCAAAGATTAGGCAC CTTTCCCACTTTGGTGCTGTCTCCACTGCTGGAAAGTTGTTTGTGATCGGTGGTGGAAGTGGAGGTGTTGATCCTTTGACTGGTGATCAAGATGGTTGTT TTGCAACAGATGAAGTCTGGTCATATGACCCTGTAGTTCGACAGTGGTCCCCTCGGGCATCAATGTGTGTTCCCCGCTCGATGTTTGCATGCTGTGTCTT GAATGGGAAAATTGTTGTGGCTGGGGGCTTCACTAGCTGCAGAAAATCAATCTCTCAAGCAGAAATGTATGACCCTGAAAAGGATGTCTGGATTCCAATG CCTGATCTTCATCGAACTCATAATTCAGCTTGTTCAGGAGTAGTAATTGGGGGAAAGGTCCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAG ACAATGCAGGGCAAGGATGGACCGTGGAGGAATTTGAGTGGCTGCAAGGTCCCATGGCTGTTGTCCAGGGTGCGCTTTATGTGATGAGCCATGGATTAAT CAAGCAGGACAAAGAAGTGAGGAAGGTAGTTGGTTCAGCATCCGAGTTCCGAAGGAGATTTGGGTTTGCAATGATTGGACTAGGTGATGAGTTATATGTG ATTGGAGGGTTAATTGGCCCTGACAGAATGAGTGACATTCAGCCATTATCAGATGTTGATGTTCTCACACTTGGGAGTGAGAGGCCAACATGGCGCCGGT CAGCTCCAATGACTCGGTGTCGTGGTACTATTCTTGGTTGTACACTACTGAGAATCTAGACCCTTCACTTTCTTCTAGGTCTTGTAATCTGCGCTCGTGG GGGGTTGTATCCCTTCAACTAGACGAAGAATCAGTTGTTCAAGGCTTACTTGTTTTGTATGTAGGCCATAATATTTGTCCTTGTTTTTATGTTGATTATT ACTTGTTGCAATGAGGTTAGTTGTTGTGTGTGTTCTATAATCTGTTCGATTCAAAAAAGGTTCACAAGTAAAAAGGCAACAAATTGGTGCTGCTCTAACA CTCAATTTATCACTTATTGCTTTTTATGAAAATCTATTTCCTAGTTGCCAAATTTCAACCCTTC
• Tissue: pods
• Gene name: LI_gene_172722;
• Additional information: details;

Expression of Ll_transcript_341821

FPKM

• PAB: 1.7
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.2
• PS3: 0.7
• PW1: 0.6
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341821

• Blastp: F-box/kelch-repeat protein SKIP30 from Arabidopsis with 68.99% of identity
• Blastx: F-box/kelch-repeat protein SKIP30 from Arabidopsis with 68.99% of identity
• Eggnog: Kelch repeat-containing F-box family protein(ENOG4110X8D)
• Kegg: Link to kegg annotations (AT3G63220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457067.1)
• Pfam: Kelch motif (PF01344.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;