| Id Trinity | TRINITY_DN49852_c1_g4_i4 |
|---|---|
| Name Transcript | Ll_transcript_341854 |
| Sequence | GTCGCAACATCCACAAGTATGTGGGACTAACTCTCCCAACGGACATTCTTTCCATCACAAGAATAGAACTTGGGTCCTTGCTCAAGGGAAATGCATGTAC CACTTGAACCGGGGCTAACTCTTCCAACTGCATTTTTTTCATCCACAAGGATAGAACCCGGTCCTTGGTCCTTGCTAGCATGTAGCACTTGAACCAATCT AATCTGTGATTAGTATTTATTTAAATGAAATGCAGTTTTTAATAAAGAAAAATAAGAAGAAAAAAGAGAGAAGGAGGAGTAATAATACTAATACACACAT ATTGTTCTTATTTCATTGTCGTGTTTTGGTTTCCATCCCTTGAACAATTAATTACATTTATACCCCTGTTGAATCCCCAGATCCAGATTTCAAACATTGC TTCCTTTCCTTCAACCCAAGGTGCACCTTCCATTACAACAGGAAGTCAATTGTGGTGAATTATAGGACACAGATGAAATAGTGGTTATAAATTTATGATG TCTGGACTGATTGAAGGGCTTCCTGACGCTGTTGCGATTAGGTGCCTTGCACGAGTTCCCTTCTACCTCCACCCGACGCTGGAGCTTGTCGCTCATTCGT GGCGAGCAGCCGTTCACAGCACTGAGTTATTCAAAGCTCGGCAGGAGGTTGGTTCATCTGAGGATCTGTTATGCGTCTGTGCTTATGACCCAGAGAATTT ATGGCAGCTGTATGACCCTCTTCGAGATCTTTGGATTACGCTGCCTGTTCTTCCCTCAAAGATTAGGCACCTTTCCCACTTTGGTGCTGTCTCCACTGCT GGAAAGTTGTTTGTGATCGGTGGTGGAAGTGGAGGTGTTGATCCTTTGACTGGTGATCAAGATGGTTGTTTTGCAACAGATGAAGTCTGGTCATATGACC CTGTAGTTCGACAGTGGTCCCCTCGGGCATCAATGTGTGTTCCCCGCTCGATGTTTGCATGCTGTGTCTTGAATGGGAAAATTGTTGTGGCTGGGGGCTT CACTAGCTGCAGAAAATCAATCTCTCAAGCAGAAATGTATGACCCTGAAAAGGATGTCTGGATTCCAATGCCTGATCTTCATCGAACTCATAATTCAGCT TGTTCAGGAGTAGTAATTGGGGGAAAGGTCCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCAGGGCAAGGATGGACCGTGGAGG AATTTGAGTGGCTGCAAGGTCCCATGGCTGTTGTCCAGGGTGCGCTTTATGTGATGAGCCATGGATTAATCAAGCAGGACAAAGAAGTGAGGAAGGTAGT TGGTTCAGCATCCGAGTTCCGAAGGAGATTTGGGTTTGCAATGATTGGACTAGGTGATGAGTTATATGTGATTGGAGGGTTAATTGGCCCTGACAGAATG AGTGACATTCAGCCATTATCAGATGTTGATGTTCTCACACTTGGGAGTGAGAGGCCAACATGGCGCCGGTCAGCTCCAATGACTCGGTGTCGTGGTACTA TTCTTGGTTGTACACTACTGAGAATCTAGACCCTTCACTTTCTTCTAGGTCTTGTAATCTGCGCTCGTGGGGGGTTGTATCCCTTCAACTAGACGAAGAA TCAGTTGTTCAAGGCTTACTTGTTTTGTATGTAGGCCATAATATTTGTCCTTGTTTTTATGTTGATTATTACTTGTTGCAATGAGGTTAGTTGTTGTGTG TGTTCTATAATCTGTTCGATTCAAAAAAGGTTCACAAGTAAAAAGGCAACAAATTGGTGCTGCTCTAACACTCAATTTATCACTTATTGCTTTTTATGAA AATCTATTTCCTAGTTGCCAAATTTCAACCCTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_172722; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341854
| Blastp | F-box/kelch-repeat protein SKIP30 from Arabidopsis with 68.99% of identity |
|---|---|
| Blastx | F-box/kelch-repeat protein SKIP30 from Arabidopsis with 68.99% of identity |
| Eggnog | Kelch repeat-containing F-box family protein(ENOG4110X8D) |
| Kegg | Link to kegg annotations (AT3G63220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457067.1) |
| Pfam | Kelch motif (PF01344.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |