Ll_transcript_342781

• Id Trinity: TRINITY_DN49854_c2_g2_i3
• Name Transcript: Ll_transcript_342781
• Sequence: GCTGTTGCAGATGGCGGAGTGTCGCATTTGTCAGGAAGAGGACAGCGTTAACAATCTAGAGTCACCATGCGGATGCAGCGGCAGCCTTAAGTATGCTCAC AGAAAGTGCATCCAGCATTGGTGCAACGAGAAAGGTGACATAACATGTGAGATATGTCATAAGGTATGCTTCTTTTATATAAAACTCTCATTTCATAGTG TTATTATAAAAGGGTGGGGATAAGTTACTCCAAGAATAACTCTTTTAGACTTACTTTTCATCTTAGCCATCAATTTCTTGGAAATCTAATGGTGTAGATC TATTCATTAATTCAAATCATTTGATGTATCTAGAATTGATGGTTAAGATGAGGAGTAAGTCTAAAAGAGTTACTCTTGGAGTAACTTGATCCCTCCCCAT TATAAAATGCAAGGATTGGTTGAGGTTGTTGATGGTCATGATTATCCTTACAAGTATAGCTTTGGAGAACAATAATTCCGTACAATGGTATATCTTCATT TGAGGTATATGATATAGCAATGGTATCACAATCGGATAGCGCATAAGAGTCCTAGGCATGTGTGACAAATGGCTAAACGCAATTATGAAAAAATAATATT GCTTCTGAGATTCCCACATTGTCAAAGTAGAGGCATTGCATGTCTAGCTTGTTGCTAGGATTGGGATAAGGTGGAATATGGGATGCTAGCTAAAATATCC AAGATACTAAGAAATTTTAGATGCCTGATATAAGGATGAATTCTGTGTAATGAATCCTTAACTTATTGTGAATCTTAGAATGGAAAAAACTGAGGGTAAC AGGCTAATGTAAGTCATATGCACAATATGTAAAATATGCTTTTAGGAAATTTAACATTTTGCATTGTTTGGTTGTAGTAGTCCACCCGTCACTGTTCAGG TTATTTGTGTCTTTTACATCTCGGGTTGGCGAACATTTATTTGGTTAACGTGGTTATCTTTGCCTCTTTGGATTGAACTTCTCTCTCTATCAGTCTCTCT CTCTCTTTGAGGTTGTCTTTCTCTCTACTTAACGTTTTCCAGTTATATTAAGTTGTGTTTATCTTTGGTGGCAATTCTTTTTTCTCAGCCCTATCAACCT GGTTATACTGCCCCACCACCTTGTCCACGTCCTGAAGAAACTACCATCGATATTGTTGGAGGCTGGACAATCTCTGGCACACCTTTGGACTTGCATGATC CTCGACTCTTGGCGATTGCAGAGGCAGAACGGCAATTCTTGGAAGCCGAATATGATGGATATGCTTCCTCTAATGCCAGTGGAGCTGCATTCTGCCGTTC AGCTGCTCTAATTTTAATGGCACTTTTACTCTTGAGGCATGCACTTTCTGTCACAGATGCTGATGCTGAAGATGATCCATCCA
• Tissue: pods
• Gene name: LI_gene_172740;
• Additional information: -

Expression of Ll_transcript_342781

FPKM

• PAB: 1.6
• PNAB: 0.1
• PS1: 0.4
• PS2: 0
• PS3: 0.3
• PW1: 0.4
• PW2: 0.8
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342781

• Blastp: -
• Blastx: Probable E3 ubiquitin ligase SUD1 from Arabidopsis with 44.68% of identity
• Eggnog: (Membrane-Associated Ring finger (C3HC4))(COG5183)
• Kegg: Link to kegg annotations (AT4G34100)
• CantataDB: Link to cantataDB annotations (CNT0000254)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445941.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;