| Id Trinity | TRINITY_DN49854_c2_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_342784 |
| Sequence | TGACAAACAAAAACAAACCAATGAAAATGACAACAATACCCTTTCCAACCTTTCAGAAGGAAAAAACCAAAGGAAATAACGCAGCACCATCACTTATTAC GACCTTCCTATATATACGGCACAACGCCATTTCCATCGCACACATTTTCTGTCTCTATATATATAAATCCCTTCTTACCCTTCCATTTCTCTTACAAAAA TATTGTCATTCTTTCGTTTTCTCGGGATCCGCGATATACCGCGCGATCTCGGGATTTCTATTGAATCCATTCCAATTCCATCACTGGTTTTGGTTTGGTT TTAAAATAAATAAATTAAAATGAGCGATCATTTGGTTCTGTATGTGGACCGGCTTGTACGGCCGATCCCGGTTGAGCCGATGAGTCAAGACCCGGTTCAG CCATCTCCTGAACCTTCGGTGCTAGTGGATGCTGCGGCCGTTGCAGGCCCCTCCGATTCTTCTTTGATGGAAAGCGACGGTGAGGGTGAGGGTGAGGATG AGGAAGAGCGGCTGTTGCAGATGGCGGAGTGTCGCATTTGTCAGGAGGAGGACAGTGTTAGCAATCTAGAATCTCCCTGCACTTGCAGAGGCAGCCTTAA GTATGCTCACAGAAAGTGCGTCCAGCATTGGTGCAACGAGAAGGGTGACATAACTTGTGAGATATGTCATAAGCCCTATCAACCTGGTTATACTGCCCCA CCACCTTGTCCACGTCCTGAAGAAACTACCATCGATATTGTTGGAGGCTGGACAATCTCTGGCACACCTTTGGACTTGCATGATCCTCGACTCTTGGCGA TTGCAGAGGCAGAACGGCAATTCTTGGAAGCCGAATATGATGGATATGCTTCCTCTAATGCCAGTGGAGCTGCATTCTGCCGTTCAGCTGCTCTAATTGT AATTCATAAATCTTGAAGTCTTTTTAATAAGTTATTTGTGGAATTAGTCAAATATATGAGCAGCGGACATAAGTATTCTTAAGGCCATGCATAGTGTTAT ACAATTGATATATCTACAAAACTATCATGTTTTATGGACATTTATATTTCATAGTTATTTGGAATTTTATGGAAAACAATTTCACTTGCTGTGTGATCTT TACATTATTGATGAACATGCACATCTTCATTTGTTCACCATTGTTTATGTCATCTATGCAAATTGCATATATTCTTTGCTAACACTTTGACATGAATTAA GCTTACTCCATTCTATCTGTTGCAGTTAATGGCACTTTTACTCTTGAGGCATGCACTTTCTGTCACAGATGCTGATGCTGAAGATGATCCATCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172740; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342784
| Blastp | ERAD-associated E3 ubiquitin-protein ligase DOA10 from Saccharomyces with 43.55% of identity |
|---|---|
| Blastx | ERAD-associated E3 ubiquitin-protein ligase DOA10 from Saccharomyces with 43.55% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YIL030C) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445941.1) |
| Pfam | RING-variant domain (PF12906.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |