Ll_transcript_343813

• Id Trinity: TRINITY_DN49860_c0_g1_i3
• Name Transcript: Ll_transcript_343813
• Sequence: ATTTAATGCACACCAACTTCACCATTACTCCATTATTCTTCATTTCTCCTCTCTCCAATAAACCATGTCCCAAACATAATTTTAACAACTTCCACATTCC CATTCATTCAACCTTTTAAGTTTTAACAAACAATCAAACAATGTTTCTCTCTTGTGCAACATTGGAGTAGATCCACCATGTCAACTAACTCAGGTAAAGG GTACACTGATTATTGAAGCAACATTGACCTTAAGCTGAAGCTTGAAGTGACTTTGAGAACAAAGAGAAAATAATGATGTTGGTAATGAGAAAAAGACTAG CTTGTTGTGCAAGAAAGACCAAAATTAGCATTGATTTTGATGGGCATGAAAATAGTATTGTGACATACAATGGCATTCTTGATAATCAATCTGATGAAAA CAGGACTAGTAGAGGAGATGGATGTATAACGGATTCGTTTAACGACGACGACTCGAGTTGTTCGTCTAGTAAAGACGCATTCGGATCATTCTCTTCAAAA TGTATGACAATGAAAAGAGATGAACAAGAATTAGAAGAATGGGAACTTTCAGAAAGTCCTCAACATTTTTATGTCAAAGAGAAACATGCTTATGCCATAC AATGTTCAGATTTAGAAGCCATGAAAGAAAAATTCGCAAAGTTGTTGCTTGGTGACGATGTTACGGGCGGAACTAAGGGCCTTAGTACAGCTTTAGTGCT GTCTAATGCCATCACAAACCTAGCAGTAACGGTTTTCGGTGAGTTGCGGAAATTGGAGCCACTATCTGAAGAAAGGAAGAGCAAGTGGTGTAGAGAAATG GAGTGGTTGCTGTCTCCTACAAACTACATGGTTGAGTTAGTTCCTGCTAAGCAAAATGGTGCAAATGGTGGAATCTTTGAGATTATGACTGCAAAAGCTC GTGCAGATATCGAACTGAATCTTCCAGCACTTCAGAAGTTGGACTCTATGCTTATTGAGACACTAGACTCGATGGCGAATACCGAGTTCTGGTATGCCGA GGGAGGAAGCGAAGGAGAAGAGAGGAACACAAGTGGAAGACAAAACCAAAGGTGGTGGCTTCCATCACCGAAAGTACCAAGAAATGGTCTTTCTGATGCC GAAAGAAAGAGGCTGCTTCATCAGGGAAGGGTGGTTCATCAAGTATTCAAGGCTGCCAAATCTATCAATGATAGTGTGTTGCTTGAAATGCCCGTGCCAG CAGTTATTAAGGATGCGCTTATGAAGTCCGGAAAGGCAAGCCTTGGAGAGGAACTGCACAAGGCTTTGATGGTCGAATCGAGTTCCGGAGAAGAAATGCT TAAATATCTCAATTTGAAATCTGAACATAGTGCTCTAGAGACCATCAATAGATTGGAAGCTGCTGCACTTTCATGGAAAGAGAGAATCATTCAAGAAGAT AGTGGAAGGTCCTCGGTTCGAATCTCATGGTCATTCATGAAGGACCCGATATCAGGTATGGATAAGATGGAAATATTGTCGGACCGCGCAGAAACAATTA TAAATCTGCTTAAAACCAGATTCCCAAACCTTCCTCAAACATTTCTGGACGCTGCGAAAGTTCAATACGGCAAGGATATCGGCCATTCAATTTTGGAAGC CTATTCCAGAGTTCTTGGAAGTTTAGCCTTCAGCATACTGTCTAGATTAGGAGATATATTGCTGGAGGATTCTTTAAGCAATCCGAATTCACCGATGACT ACAACTTCCTCTCCTTGGATAAATCTTTCTCAAGCTTTGGTGGTCGATTCACGGATCAGGCGTTCATTAATCGACACGATGAACAAGACAGATAGACAGC ATTGTGATTCTAGTTGTGGTAGTACATCTGATATAGAACATTCGTCTATCGAGGCCGAAGCCGCCTCTACAACTGCTACGCCAAGCCGTAGCCGAGTTTT GTGCACTGGTAAAGAGGCTTGTAGAAGTGTGTCTCCTCAAAATTCCCCATAATGGTGCTTGGTAGCCGCTTTTGTAAGTGTTAGTTAATGCTATTATTGT AGAAGTCCCCGTGTTGCCCATCTTTTTTGCCGATAAAAAAAGCAGCGAAACACATTGCTTAATGGCTAAGCTAACAATCATATATCTAAATGACACTCTA GATTTAACTATCACTACATTGTAGAAACTAAACTATTATTACAACAACAAACTAGAATTGATGACCAAAACCTATTTAATCTCACATTATTTCTCTCAGA CATGAACATGAAGCTATTAAGCACAAACTTGCTTATACAGTTACTTCCATGATATTAAACACTATACTGCTACTAAGGTTGGTTTAAAGTCGAGTCCACC TAATGTGATAAAGTCTTGGTTGTTGTTGTAAGGTCGGTTCAAACAAAAGCTTGTAGCTTCTAGAGGTATACATTGATTACGATAAAACAGACCTGTATTG TAATCGTT
• Tissue: pods
• Gene name: LI_gene_172781;
• Additional information: details;

Expression of Ll_transcript_343813

FPKM

• PAB: 0
• PNAB: 1.6
• PS1: 2.1
• PS2: 0.6
• PS3: 2
• PW1: 1.1
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343813

• Blastp: Rop guanine nucleotide exchange factor 14 from Arabidopsis with 56.75% of identity
• Blastx: Rop guanine nucleotide exchange factor 14 from Arabidopsis with 58.32% of identity
• Eggnog: Guanine nucleotide exchange factor(ENOG410YFCK)
• Kegg: Link to kegg annotations (AT1G31650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446939.1)
• Pfam: PRONE (Plant-specific Rop nucleotide exchanger) (PF03759.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;