Ll_transcript_343675

• Id Trinity: TRINITY_DN49862_c1_g1_i10
• Name Transcript: Ll_transcript_343675
• Sequence: ATTTGCAACAAGGAGCGTGAACGCAAGTGACCCCATACTAATGTGTGGTGAGGAATCCCCGGTGTGTTTGATTATGTAACCTTTTATTGACCCTTCCTCT CAATGCAATAGAAGAAGATACCTTGGATATTGGAATCTTCTTCTTTTCTCTTCTCTTCTCTTATTTCTTCTTCACTTAATAATAACTTCACAACACAACA CAAGTACCGAAACCAAAACAAGACCAAAACCAAAACCAAAAACACAGAATGAGAGCTTTGAATTCTCATTTTGTGCTTATCGATTTTAACTGCTCCAATT ACGCTCCCACCTCAACTCTCACATATTTTAAGAAAAACTCCAACGTCATTTCCAAACTCTCTTCGTCATTTCATCGAACACGTCGTTCGGGTAAGGGAAT TCCATCCTGTAACTCCTCTTCCACATGGATTCCCTCGCCGGAGATTCGCCGGCCATCCGATCGCTTCCTTTCAGGAAATGGGTCGCCGGCGAATTCTCAA AGCACGCCCTCCACGTCGCGGCCCGAGTCCGCGACGGAGTTGGAGGTATTTCTGGAGTTGTTGCCTTTGAAGATGAGGAGAGAGTTATATAGGCATGATG AGATTGGAGGGTTGATAGAGGTTGTGATGGATCTTGGTAGAAAACCTCTTGCAAGGTTTCCTTCTGGTGATTGGGTGATTTCAGAACACCCCATCAAGCT TGAAGATTTATCCCATGCCATTTCAAAGGTTGGTGAATTTTCTGATGACAACCGATCTGGTATCAATAGCTCTTTACATCGTATTAGTGCAATTCGGAAT CGTAAGATGCAAATCATTGGCCTTACTTGCCGGGTAGGTCGAGCTGTAAATGGTAGTGCTGAAATCTTACGTGATTTGGTTGAGGATGGAGGTTCTATTT TGGTAATAGGACCTCCTGGAGTGGGTAAAACAACCTTAATCAGAGAGATTGCTAGGATGCTGGCAGATGAATTCAGGAAGCGTGTTGTAATAGTAGATAC ATCCAATGAAATTGGAGGTGATGGAGATGTTCCTCATGCAGGCATAGGCAGGGCAAGGAGGATGCAAGTTCCAAACGTAAATATGCAGCATAATGTTATG ATTGAAGCAGTTGAAAATCATATGCCTGAAACAATTATAATTGATGAAATTGGAACAGAGCTTGAAGCATTAGCAGCCAGTACAATTGCTCAAAGAGGAG TTCAATTGGTTGGAACAGCACATGGAATGACCATTGAAAACATAATTAAAAATCCCTCTCTTCAAATCCTTGTCGGTGGCATAGAGAGTGTAACACTTGG GGATGAGGAAGCCAGGAAAAGGAAAGTGCAGAAAACAATTCTTGAAAGGAAAGGACCTCCTACATTTATATGTGCTGTTGAGTTGATATCTAAAACTGAA TGTCGTGTTCATCATAGATTAGATGCAACCGTGGATGCCATTTTGGCAGGAAAATCTCCATTATTTGAAGTTCGTCAATGGGATGATTCTGCTAATGATT TGGTGAAGTATGCTCCAATGCCTGAAAAAAGTCACGGAGAAACACCTGATTTATCTAAAAATAATAACACGAGTTCTGATATAGAGTCTGAGGAGGAAGA TGAAGAACAACCTCCTACCCTGTCCAAAAAGCAGAGTACTAGTGAATCTATAATCAAGAGGAGTTCACCGGTGCAAGTGTATACTTACAAGATCATTGAA GCTGATCTACTACAAGTAGCAAAGGTGATGGGGCTTGAAGATTTAGTAGATGTAACTGATGACATTGGAGCTGCTGATGCAATTCTAGCATCCAGTAATG AGATGCGACAGCACCAATGGATCCGCAGTGTGGCAAAGTTCCACCAGTTACCTGTGTTTGTTATCAAGTCCAATACCATGGCACAAATGGTAAAGGCAAT ACGTATGATCCTTGGGTTAGAGTCATTTGGCCCTACATCAAAGAAGCCATTCAGTGACTCTCTCGATATTGAAATCGACGATGATGAACCTAAACGAAAA CCATCTCTGGAAGAGATTGATGCGTTGGAGGAGGTCCGTCTCGCAATAGAGTACATTGTGATTCCTGGTGGAGAGGCTGTGGAACTTCTTCCCAGACGTT CTGAAATAGTTGCCCGACAGCTTGAACTTGTGGAAAGCTATCAGTTAGCTGCTGAAAAGTCAGGTACAGAACAGAACCCCAGGTTGCAGATTCTTCCTTT GAGGCTAAATTCAAAGAACCCCTCTAAATCTAGTTCTGGTTCCCGCAAGAAATCAAGTCCCGCCACCGTATCTACTGCTGCTGCTGGCAATGGTAGCAGT GTCACCAGGCTTCCACTTTTGCCTGAATGATTCTAAAATTTCTCCAGTGCTAACACGTTTCACTTCCCTGGTTAGTACATGTAACATGTACAGTCATGTA AATAATTTATTCACTGCAAAGTCGGAGTCGGGTGTGATGGGTGATGTTTGGAGGTTCGATCCTCCACCCTACCACCCTTTCCGATGCTTGCATTTCCAGT GTATTGTATTGTAATTGTAATTGTAATAATAAAGAAAGAAAACTGTTCAGGAATGTAAGGGACAGATTTCAATTCCTGGAAAAAAAGTTCGTCTTTTGTT TTGAAAACAAAATAATTGTCTGGAGATGACCATTCTTGGATGTATTTCCAGATCATGTATTAGATAGAAACACTTGTTTTAAGAGCAAGAAAATGAGAAC ACCTCTAACATGTTTTCAAAATATGTTTATTTGTTTTCACCGTAGCATATATGTAATTATGAAATAATTAATGGCATTTTCTGTAATAAAAGGAAACTCA TTTCAATTTCTTTCCCAAATCACGTTTTCTTATTGCAATTTAACTCATACTTGCT
• Tissue: pods
• Gene name: LI_gene_172809;
• Additional information: details;

Expression of Ll_transcript_343675

FPKM

• PAB: 590.1
• PNAB: 13.7
• PS1: 16.4
• PS2: 6.7
• PS3: 13.5
• PW1: 17.4
• PW2: 17.7
• PW3: 20.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343675

• Blastp: Uncharacterized protein ycf45 from Porphyra with 44.73% of identity
• Blastx: Uncharacterized protein ycf45 from Porphyra with 44.08% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441375.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;