Ll_transcript_343670

• Id Trinity: TRINITY_DN49862_c1_g1_i5
• Name Transcript: Ll_transcript_343670
• Sequence: ATTTGCAACAAGGAGCGTGAACGCAAGTGACCCCATACTAATGTGTGGTGAGGAATCCCCGGTGTGTTTGATTATGTAACCTTTTATTGACCCTTCCTCT CAATGCAATAGAAGAAGATACCTTGGATATTGGAATCTTCTTCTTTTCTCTTCTCTTCTCTTATTTCTTCTTCACTTAATAATAACTTCACAACACAACA CAAGTACCGAAACCAAAACAAGACCAAAACCAAAACCAAAAACACAGAATGAGAGCTTTGAATTCTCATTTTGTGCTTATCGATTTTAACTGCTCCAATT ACGCTCCCACCTCAACTCTCACATATTTTAAGAAAAACTCCAACGTCATTTCCAAACTCTCTTCGTCATTTCATCGAACACGTCGTTCGGGTAAGGGAAT TCCATCCTGTAACTCCTCTTCCACATGGATTCCCTCGCCGGAGATTCGCCGGCCATCCGATCGCTTCCTTTCAGGAAATGGGTCGCCGGCGAATTCTCAA AGCACGCCCTCCACGTCGCGGCCCGAGTCCGCGACGGAGTTGGAGGTATTTCTGGAGTTGTTGCCTTTGAAGATGAGGAGAGAGTTATATAGGCATGATG AGATTGGAGGGTTGATAGAGGTTGTGATGGATCTTGGTAGAAAACCTCTTGCAAGGTTTCCTTCTGGTGATTGGGTGATTTCAGAACACCCCATCAAGCT TGAAGATTTATCCCATGCCATTTCAAAGGTAGTTTAATATGTTGGATAAAGATCACTTATCCCTATACTTCATCATCCAAATTTAGCTAATATAAAAATG TTAATTTTTTATTTTATTTATGTGTCAATATTTGATTGATCTAAGATATGTAATGAGATATCATTTGGGGAAAGGTGATCAGGCTCAACATTTTCTGATG TTTTTGCCCACTATAATAATGGTTGCACTTTTGTTATTTGTGAAAATAAAAGTAAGGAGAGTATGTGAATAAAAAAATATCATCTCATGCTACTTATTTA TCCCATTAACCATGAACATATTCGGTAAACAATCTGTTAGACTATTTAATACACATGTTTACACATGAATTTATACATCAATAATCAAAGTAGCCTAATA TAAGTGTTGCATTAAAAATAGGTGTCATGTCTTTTCGTATTCAGTTATACAAGAAGGAAGTAGTGTGAGAATGGTGCAATGAGTGTCGTGTAAAAAATAA CGTTACTACTTTTTTAGGGAAAAGTTGATTTACTACTTTTTGTATTTTTGAACGGTGTTGAAGTTCAAAATTGTACAAATAATATAATTCTTTTCTTAAA CATTTGGTGTTCTCTCTTTTTAGTAGTAATAGAATCACTTTGATTTGTTTATTTATAATATTTTAAATGGAAAATATAATCCAATTATCTGCTGTGAAAA AGTTGAAGTTGGGGCCAAAGGCCTAAAACCAGAATATTGAGAATGTGTAAGGATTTGTCTTTTTAATGAAGATTTGAAAGAACTCTTCTTTTTCCACTAT TACACAAAGATTGAGTACATCTCATACTCCCTAGAGCCTAGAATGGTGGGAGTTGCTCTTTACACGTTATAAATGGTCACAATTTGTCCTTTATTTTACT GTTGGTGCTAAATGCTAATGATTAATATCTTCATATATAAATAATTCTTCTTATTTTAGGTTGGTGAATTTTCTGATGACAACCGATCTGGTATCAATAG CTCTTTACATCGTATTAGTGCAATTCGGAATCGTAAGATGCAAATCATTGGCCTTACTTGCCGGGTAGGTCGAGCTGTAAATGGTAGTGCTGAAATCTTA CGTGATTTGGTTGAGGATGGAGGTTCTATTTTGGTAATAGGACCTCCTGGAGTGGGTAAAACAACCTTAATCAGAGAGATTGCTAGGATGCTGGCAGATG AATTCAGGAAGCGTGTTGTAATAGTAGATACATCCAATGAAATTGGAGGTGATGGAGATGTTCCTCATGCAGGCATAGGCAGGGCAAGGAGGATGCAAGT TCCAAACGTAAATATGCAGCATAATGTTATGATTGAAGCAGTTGAAAATCATATGCCTGAAACAATTATAATTGATGAAATTGGAACAGAGCTTGAAGCA TTAGCAGCCAGTACAATTGCTCAAAGAGGAGTTCAATTGGTTGGAACAGCACATGGAATGACCATTGAAAACATAATTAAAAATCCCTCTCTTCAAATCC TTGTCGGTGGCATAGAGAGTGTAACACTTGGGGATGAGGAAGCCAGGAAAAGGAAAGTGCAGAAAACAATTCTTGAAAGGAAAGGACCTCCTACATTTAT ATGTGCTGTTGAGTTGATATCTAAAACTGAATGTCGTGTTCATCATAGATTAGATGCAACCGTGGATGCCATTTTGGCAGGAAAATCTCCATTATTTGAA GTTCGTCAATGGGATGATTCTGCTAATGATTTGGTGAAGTATGCTCCAATGCCTGAAAAAAGTCACGGAGAAACACCTGATTTATCTAAAAATAATAACA CGAGTTCTGATATAGAGTCTGAGGAGGAAGATGAAGAACAACCTCCTACCCTGTCCAAAAAGCAGAGTACTAGTGAATCTATAATCAAGAGGAGTTCACC GGTGCAAGTGTATACTTACAAGATCATTGAAGCTGATCTACTACAAGTAGCAAAGGTGATGGGGCTTGAAGATTTAGTAGATGTAACTGATGACATTGGA GCTGCTGATGCAATTCTAGCATCCAGTAATGAGATGCGACAGCACCAATGGATCCGCAGTGTGGCAAAGTTCCACCAGTTACCTGTGTTTGTTATCAAGG TGCCTTCTTACTTCCTCCTTATATGTTCCTCCAATATATTCTCATTTTGTCTTTTGATGAACTTTTTGTTTCTTGCAGTCCAATACCATGGCACAAATGG TAAAGGCAATACGTATGATCCTTGGGTTAGAGTCATTTGGCCCTACATCAAAGAAGCCATTCAGTGACTCTCTCGATATTGAAATCGACGATGATGAACC TAAACGAAAACCATCTCTGGAAGAGATTGATGCGTTGGAGGTACAAGCCCTTTCCGTTTATTTAATTAGTATCTGGTTTTTCTCCCTGAAAGTTCCATTA TATGTGCAATTATTGTTTATGCTGTGTATCAGCAGTCTATCAATTGCTTTATGTTTGTGCCCTCTTGAAAGGTTGGCCTTTTCTTCTTTTCACATTTGGC AATTAAATTAGTATAACCAACTTATATTTTTTGTCCATTCATATCATATTAAATTATTGTATTTGACTTGGAGAAAAACACATTGCTGCCAATAAAGTGG TAAGGCCAAAAAACATTAACAAAAAGGTCATTGGTTCCATTACCAATGGTGGACATTGAAAGGTAGGTTATTTGTATCATTAAGCTCTAGTTAATGCTTT TGGCATGCCCTGAATTTGGAACGTAGCAACCTTTCATTATAATTAGGGAATAAAGTATCTCCTTATGCAAGAAGATAATTTATCTCCTTAAATCCATTTA CTATTTGACATGTGTCTTAATTTTATTTTTATAATATATTTTAAAATGAA
• Tissue: pods
• Gene name: LI_gene_172809;
• Additional information: details;

Expression of Ll_transcript_343670

FPKM

• PAB: 6.2
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343670

• Blastp: Uncharacterized protein ycf45 from Porphyra with 47.73% of identity
• Blastx: Uncharacterized protein ycf45 from Porphyra with 47.91% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441375.1)
• Pfam: Type II/IV secretion system protein (PF00437.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;