Id Trinity | TRINITY_DN49862_c1_g1_i9 |
---|---|
Name Transcript | Ll_transcript_343674 |
Sequence | ATTTGCAACAAGGAGCGTGAACGCAAGTGACCCCATACTAATGTGTGGTGAGGAATCCCCGGTGTGTTTGATTATGTAACCTTTTATTGACCCTTCCTCT CAATGCAATAGAAGAAGATACCTTGGATATTGGAATCTTCTTCTTTTCTCTTCTCTTCTCTTATTTCTTCTTCACTTAATAATAACTTCACAACACAACA CAAGTACCGAAACCAAAACAAGACCAAAACCAAAACCAAAAACACAGAATGAGAGCTTTGAATTCTCATTTTGTGCTTATCGATTTTAACTGCTCCAATT ACGCTCCCACCTCAACTCTCACATATTTTAAGAAAAACTCCAACGTCATTTCCAAACTCTCTTCGTCATTTCATCGAACACGTCGTTCGGGTAAGGGAAT TCCATCCTGTAACTCCTCTTCCACATGGATTCCCTCGCCGGAGATTCGCCGGCCATCCGATCGCTTCCTTTCAGGAAATGGGTCGCCGGCGAATTCTCAA AGCACGCCCTCCACGTCGCGGCCCGAGTCCGCGACGGAGTTGGAGGTATTTCTGGAGTTGTTGCCTTTGAAGATGAGGAGAGAGTTATATAGGCATGATG AGATTGGAGGGTTGATAGAGGTTGTGATGGATCTTGGTAGAAAACCTCTTGCAAGGTTTCCTTCTGGTGATTGGGTGATTTCAGAACACCCCATCAAGCT TGAAGATTTATCCCATGCCATTTCAAAGGTTGGTGAATTTTCTGATGACAACCGATCTGGTATCAATAGCTCTTTACATCGTATTAGTGCAATTCGGAAT CGTAAGATGCAAATCATTGGCCTTACTTGCCGGGTAGGTCGAGCTGTAAATGGTAGTGCTGAAATCTTACGTGATTTGGTTGAGGATGGAGGTTCTATTT TGGTAATAGGACCTCCTGGAGTGGGTAAAACAACCTTAATCAGGTAAACCTTGTCAACGAGTCTGAGTAGATTTCATGTGTTTCTATTTGTACATGGAAG TTATTTATTTTGTTAGTGCCGATGTAATGGCGTTTTATTCTTTCCTTTCATGTTTTCTATCACTTTTAATAAAAAAATCGTTATTGTAGACATTATAAAA ATGTGTTTACAAGTTATATGAATTTCAAAATTGGTCAAGTGAATTATCTAATATGCATGTCTGAAGAAGCTTTGTTTGTGCAGAGAGATTGCTAGGATGC TGGCAGATGAATTCAGGAAGCGTGTTGTAATAGTAGATACATCCAATGAAATTGGAGGTGATGGAGATGTTCCTCATGCAGGCATAGGCAGGGCAAGGAG GATGCAAGTTCCAAACGTAAATATGCAGCATAATGTTATGATTGAAGCAGTTGAAAATCATATGCCTGAAACAATTATAATTGATGAAATTGGAACAGAG CTTGAAGCATTAGCAGCCAGTACAATTGCTCAAAGAGGAGTTCAATTGGTTGGAACAGCACATGGAATGACCATTGAAAACATAATTAAAAATCCCTCTC TTCAAATCCTTGTCGGTGGCATAGAGAGTGTAACACTTGGGGATGAGGAAGCCAGGAAAAGGAAAGTGCAGAAAACAATTCTTGAAAGGAAAGGACCTCC TACATTTATATGTGCTGTTGAGTTGATATCTAAAACTGAATGTCGTGTTCATCATAGATTAGATGCAACCGTGGATGCCATTTTGGCAGGAAAATCTCCA TTATTTGAAGTTCGTCAATGGGATGATTCTGCTAATGATTTGGTGAAGTATGCTCCAATGCCTGAAAAAAGTCACGGAGAAACACCTGATTTATCTAAAA ATAATAACACGAGTTCTGATATAGAGTCTGAGGAGGAAGATGAAGAACAACCTCCTACCCTGTCCAAAAAGCAGAGTACTAGTGAATCTATAATCAAGAG GAGTTCACCGGTGCAAGTGTATACTTACAAGATCATTGAAGCTGATCTACTACAAGTAGCAAAGGTGATGGGGCTTGAAGATTTAGTAGATGTAACTGAT GACATTGGAGCTGCTGATGCAATTCTAGCATCCAGTAATGAGATGCGACAGCACCAATGGATCCGCAGTGTGGCAAAGTTCCACCAGTTACCTGTGTTTG TTATCAAGTCCAATACCATGGCACAAATGGTAAAGGCAATACGTATGATCCTTGGGTTAGAGTCATTTGGCCCTACATCAAAGAAGCCATTCAGTGACTC TCTCGATATTGAAATCGACGATGATGAACCTAAACGAAAACCATCTCTGGAAGAGATTGATGCGTTGGAGGAGGTCCGTCTCGCAATAGAGTACATTGTG ATTCCTGGTGGAGAGGCTGTGGAACTTCTTCCCAGACGTTCTGAAATAGTTGCCCGACAGCTTGAACTTGTGGAAAGCTATCAGTTAGCTGCTGAAAAGT CAGGTACAGAACAGAACCCCAGGTTGCAGATTCTTCCTTTGAGGCTAAATTCAAAGAACCCCTCTAAATCTAGTTCTGGTTCCCGCAAGAAATCAAGTCC CGCCACCGTATCTACTGCTGCTGCTGGCAATGGTAGCAGTGTCACCAGGCTTCCACTTTTGCCTGAATGATTCTAAAATTTCTCCAGTGCTAACACGTTT CACTTCCCTGGTTAGTACATGTAACATGTACAGTCATGTAAATAATTTATTCACTGCAAAGTCGGAGTCGGGTGTGATGGGTGATGTTTGGAGGTTCGAT CCTCCACCCTACCACCCTTTCCGATGCTTGCATTTCCAGTGTATTGTATTGTAATTGTAATTGTAATAATAAAGAAAGAAAACTGTTCAGGAATGTAAGG GACAGATTTCAATTCCTGGAAAAAAAGTTCGTCTTTTGTTTTGAAAACAAAATAATTGTCTGGAGATGACCATTCTTGGATGTATTTCCAGATCATGTAT TAGATAGAAACACTTGTTTTAAGAGCAAGAAAATGAGAACACCTCTAACATGTTTTCAAAATATGTTTATTTGTTTTCACCGTAGCATATATGTAATTAT GAAATAATTAATGGCATTTTCTGTAATAAAAGGAAACTCATTTCAATTTCTTTCCCAAATCACGTTTTCTTATTGCAATTTAACTCATACTTGCT BLAST |
Tissue | pods |
Gene name | LI_gene_172809; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343674
Blastp | Uncharacterized protein ycf45 from Porphyra with 40.5% of identity |
---|---|
Blastx | Uncharacterized protein ycf45 from Porphyra with 40.13% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441375.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |