Id Trinity | TRINITY_DN49863_c3_g1_i21 |
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Name Transcript | Ll_transcript_342084 |
Sequence | TTTTTTGCCGCACAATTCTCGTCAATGTCGCTCTCCGACGGCGCAGATTGAACGCTGTTGTTGCAAGCCACGTTTTCCCATTTTCCTCTTTCTCTCTTTC TCTCTCTTTCTCTTCAATAATTTTCAATTCCCTTTTCTCATTTCATTTCATTCATTTTTTTCATCTTCTCTCTCTCTCTGAAGAAGCCTCAATTTCCACT CCGATTTTTATCACACTTTGATCCAATTTTCGGGATGGAAAATAGAGGTGGAACAGAGGAAAATAGAGTCTTTTAATCATTACTGCTTTTTTTGTTTCCA ATTTCAGGTGGTGCTGCAATTTGATTGATTTTGATTATTAGGGGTAAAAGGGTTCTCAATTTTGTTGGAAAATCTTCAAATCTTATTGTAGTTGCTCTTT TATGCCTTGTCAATAATCCAAGATTACTTCATCTGTGTGGTTATATATACAACAAGTGTATCTCTCTTTCGTTGCGAAAGCGTGCGTGATTTCTTGCTGC AGTTCTGAAAATATTGTGTCAACTAGTAATTGGACGTCAATTTTTGTAATTACATGTTGAAGTTGCTGTTTCCATGAACTTGGGTGACAACAGTGTAGAA TGTGGGTTGTTCAGCGATTAGTACTTCTCAGCCTATTACTGTGAAAAGAGTTTGCAGCTTGAGAAGTTGAGAAGGTATTATTTATGGCACTGAATAAGGC AGGAAATCTGTTAGGTTCCAATACTGGGAAGGATCATTGTTTGTTTCGTAATGATGAAATTGCTTGTAGAAGAGTTCCGGTTTCACCTGAGATATTCGGA AAGCATGAAGATAGGTTTGGGTTGAATATGGAGAATGGACACATCAAGTATGAAGGTCTTACAAAAATTTTGGGGTTGAGGAGAATGGAATCTGAGAGTT CTGAGATAAGCGACTTTATTTCTATGAAAGAGCCGACCCAGGAGATGGAAAATGGGGCTTTTGTAAATAGTGTAAGCAAAAGCAATAAAGAAGCCAGTGC TTCCCATTCCTCAAAGAAAGCCGTTGATCAGTCCATTACTGACATATCTGGTCATGGTCCAATTGTGTCCCCCCGTATGCATTATGAATATGAATCTACT TATTCGAATGATCATTCTGGTTCAGGAGTGCTAGATGAATCTCGATCTGGGAAAATGAAGTTTCTATGCAGCTTTGGTGGGAAAATATTACCAAGGCCCA GTGATGGGAAACTCAGATATGTGGGGGGACAGACTCGAATGATATCAATCCGAAAGGATATCTCATGGGAAGCACTTATCAAGAAGTCTTTGGGTTTTTG CAGCCAGCCTCATACAATCAAATATCAACTTCCGGGGGAGGATCTTGATGCTCTAATATCTGTCTCCTCTGCCGAGGATCTTCAAAATATGATAGAGGAA TACCACGGGCTTGAAAGACATGAAGGATCTCATAGGCTTAGAATTTTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCTCCGTTCGAGGCAAGCAACA TTCAGCAGAGTGATCCTGGCTACCAATATGTTGTTGCTGTGAATGGCATATCAGACCCTGCTCCTGGGAAAAGCATTGGAGGGCAGTGTTTGACAAATGA GGCAAGTCAGTTGGATACAAGTTTGAATCTCGCTCCTTCTCCCAATTCCCCTTATACTTCGGATGCCAAGGGTGGCAGTGGTAATGCTTTAAATCCAGAT GGAAATTTTAATGATTCGCCGATTCTTCACAGATCTCCCAATCAATCTCCACTAGTTTCCCCTATTCCAATCGAGGGAAGAGGTTCAAGCATCGGTTATA CGCAGTTGCTTTGTAATAATTCATGCCAAGGAAGTATTGAGAGCAATACATCCTTTACCACAGCTCAGCTACAACCGGAGAACTCCAGCACGAGCACTGC TGATTATAGATACCCTCAACAAGTACCTGTGACTATGTTAAGTGACAGTCTCCGTAATCAACACAAAGATGTTGTTAAGCCGGAGAAGCACTATGGAGAG CATTTTGGCAACAGCAATTCCGACAAGGAATCAGTGATTCCTTTATATATTAATCCAAATGAGGGCTATAGTGATGAACTTTATGGTAAAAAGCCCTTGC ATAAGGAAAGAATACTCCACTCTGGAAATCCTCCTTCACGTTTGGATGATGTAATCTGTCAACAGGCTGAATCTGATGGTATTACTTACACCCCTTTTGT ACTGCCTCATGCTTTTTCTGATTCGCAGTTGCATGAGAGCGAAACTAGATCTGGTTACTGCTCACAAGAAGGAACTGGCTTATCTTTCTCCTTGAACCAT GCAAAGGCTCAGTCATCTTCAATGTTATTGTCTAGTGTCTCACAAGGGGGCCTTATGGAGGTACATAATGATTCCATTCTCCTTTATCCTCAAATACAAA GTATGCTAACAAGTACTACCGAGTCATCCGAGTTGAACAAAAGGCAGGATGTTGCATCCTCTTCTCCATATTCCGAGTCATTCGGAACGAATGATCCCGT TCATAGGGATAACATTTTAATTGGAAAAAAGTACCCTGTTGCTCAAACTAATCTAAGTGGATCTAGCTTTGTAGTGAAGCATGCTGAGGACAATTCTTTG GCTTCAGAAGTGATTAAGAGAACTGAGGAAAAGAATCCTACTGAAATGAAGGATAGAAAAATTTACGAGGGCAAAACACCTGGTGCTAATAGGGTTCATG TCGCTGAATTGAATCTTTTGGACTCCTTCCCATCTAATAATTTGAATGCCAAGGTTAATATGCAAAACGATTGGGAGCTACCTCCTGAGGATAGCATTGC TGTATCATTAGGCACACTGGGAGTCTGCAACAATAATCACATGGACAAGATCCCTTCTCATCTTGACCAGAGCCGAAGGACTAGTGACAGTAAGAAATGT GCTGTGACTGATGGTTTGAATGATGAACAAGGTACTGGTTTTTCGTTGACAAGAAACTCTGACTCAAATGGCCCAACTTTCAAAGGCGGAGAAACCACTC GTGACAAAATTTCTCTTGGAGATATGTTTGAACTGTCCATTGACTTAGATTCTTATAAAGCTTCACAAGTGCAACATTCCATGAATCCGAAGGGTACAGG TCTTCATGAAAATCCAACTTTAAGCTCTGCATCTTTGTATCATGCTGTACCTCATGATGGTCATGGTCCAATTTCAAACTTCCCTATGAATCACCAGCCC AGTCCAAAGAAGAATATTTCTTTTAAGAAAATCCCTTCCTTAATTGATCATGACTCGATAACCAGTCCTGAACAGAAGGTTGATCAGGTTACCAGGGGAC ATTTTGCTGAAAAATCAAAAGCTGGCGATGTCATGTCGGAGCAATCAAGAAGACCAGAAAAGTGCAATGATGTAAATCAAGTGGAGGCATTTGTTGTAGT AAAAGAAGTGATTAGTGTTGTTCCTCCGGACATTTATTCTTCTTTGGCAACCACCCCAAATATTGTGGACGAAATTGGAAGTTGTGTTGTATCCTTGTCT CCTATGGAGGAAGAGAGCAACATCCTAGAGTCTGAACCTGAGGATTTTAAAGACGATGAATCAGACAGGAATGAATTCCTTACTGATGCAATGATAGCAG AAATGGAAGCAAGCATCTATGGTTTGCAGATAATAAGGAATGCTGATCTTGAAGAACTTCAGGAGTTAGGATCTGGTACTTATGGAACGGTTTATCATGG AAAATGGCGGGGGTCGGACATTGCTATTAAGAGAATTAAGAAGAGCTGCTTTGCAGGGAGATATTCTGAGCAAGAAAGATTGACAAAAGACTTTTGGAGA GAGGCGCAAATCCTTTCAAATCTTCACCATCCTAATGTGGTTGCATTTTATGGGATAGTACCAGATGGATCTGAAGGAACCCTGGCGACCGTAACTGAGT ATATGGTTAATGGTTCCCTTAGGCATGTCCTCGTCAAGAAAGATAGATTACTAGATCGTCGTAAAAAGCTAATAATTGCAATGGATGCATCCTTTGGTAT GGAATATTTGCATTCAAAAAATATTGTCCATTTTGATTTGAAGTGTGACAATTTGCTAGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGA GATTTTGGATTATCAAGAATTAAACGTAATACCCTGGTATCTGGTGGTGTTCGTGGAACCCTTCCATGGATGGCACCAGAACTGTTGAATGGCAGCAGCA GCAGGGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGATATTGACAGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCCAT TATTGGGGGGATTGTAAAAAACACTCTTCGGCCACCTATTCCGGAACGTTGCGATACTGAATGGAGGAAGCTCATGGAAGAGTGCTGGTCACCTAATCCC GAAAGCCGACCATCATTCACAGAGATAACACGCAGGTTACGATCCATGTTTATGACCCTTCAAGCAAAGGCATTGCCAGGCATGTCAGTTAAGGCCTAGT GCTTCTTCTTGAAACCAAGGCATATTTTCCTGAAATTATGATTGTTATTACAAGACCTAATCATTCAAGACGAATCGCGATTGAGGTCGGCCGGCATAAG TGCTTGAAGGGTTAGCATAATATTTGGCAATTGTTTCTTCTCATTTTTGTTAGCCATGATATCTTCATTTGTTTATTCTTGGTGTATAGTAGATTGTATC TCTCAATTTTTCTGCTTGGGCATTATCTAAATCTCTGGCAAAAGAATAGAGAAGGAAAAAAGGTTTGTTTAGTGTACATATGGAGAATTGTGCTTGTAAG ATATGTTCTTGTTGATGTGAGTTTTCTCCCTCTCCTGCCATGTATTCTTCCTCTTTTTTGAGATCAGAATATTTATACAATTTTTGAGTGTGACTATTTC TGTGAAGATATTTCTATCTTTCATCCCTTCATCCAAATTATTGAATTATTGAAA BLAST |
Tissue | pods |
Gene name | LI_gene_172824; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342084
Blastp | Serine/threonine-protein kinase EDR1 from Arabidopsis with 36.61% of identity |
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Blastx | Dual specificity protein kinase splA from Dictyostelium with 38.52% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT1G08720) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463733.1) |
Pfam | PB1 domain (PF00564.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |