Ll_transcript_342086

• Id Trinity: TRINITY_DN49863_c3_g1_i23
• Name Transcript: Ll_transcript_342086
• Sequence: TAAAATTTGAGACATTAGAATAAGCATGTAACACTTAAACGATGTAATTTTTTTTGGGTGAATGAATTAGAGCACAGCACGTAGGAAGAGGGAGAGAAGA AAAGAAAGTGTTTATAATATTTTTTTTGTTTTACACACCGGGAGCAATCATATCCGAGCCTGTATCTCTCTTTCGTTGCGAAAGCGTGCGTGATTTCTTG CTGCAGTTCTGAAAATATTGTGTCAACTAGTAATTGGACGTCAATTTTTGTAATTACATGTTGAAGTTGCTGTTTCCATGAACTTGGGTGACAACAGTGT AGAATGTGGGTTGTTCAGCGATTAGTACTTCTCAGCCTATTACTGTGAAAAGAGTTTGCAGCTTGAGAAGTTGAGAAGGTATTATTTATGGCACTGAATA AGGCAGGAAATCTGTTAGGTTCCAATACTGGGAAGGATCATTGTTTGTTTCGTAATGATGAAATTGCTTGTAGAAGAGTTCCGGTTTCACCTGAGATATT CGGAAAGCATGAAGATAGGTTTGGGTTGAATATGGAGAATGGACACATCAAGTATGAAGGTCTTACAAAAATTTTGGGGTTGAGGAGAATGGAATCTGAG AGTTCTGAGATAAGCGACTTTATTTCTATGAAAGAGCCGACCCAGGAGATGGAAAATGGGGCTTTTGTAAATAGTGTAAGCAAAAGCAATAAAGAAGCCA GTGCTTCCCATTCCTCAAAGAAAGCCGTTGATCAGTCCATTACTGACATATCTGGTCATGGTCCAATTGTGTCCCCCCGTATGCATTATGAATATGAATC TACTTATTCGAATGATCATTCTGGTTCAGGAGTGCTAGATGAATCTCGATCTGGGAAAATGAAGTTTCTATGCAGCTTTGGTGGGAAAATATTACCAAGG CCCAGTGATGGGAAACTCAGATATGTGGGGGGACAGACTCGAATGATATCAATCCGAAAGGATATCTCATGGGAAGCACTTATCAAGAAGTCTTTGGGTT TTTGCAGCCAGCCTCATACAATCAAATATCAACTTCCGGGGGAGGATCTTGATGCTCTAATATCTGTCTCCTCTGCCGAGGATCTTCAAAATATGATAGA GGAATACCACGGGCTTGAAAGACATGAAGGATCTCATAGGCTTAGAATTTTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCTCCGTTCGAGGCAAGC AACATTCAGCAGAGTGATCCTGGCTACCAATATGTTGTTGCTGTGAATGGCATATCAGACCCTGCTCCTGGGAAAAGCATTGGAGGGCAGTGTTTGACAA ATGAGGCAAGTCAGTTGGATACAAGTTTGAATCTCGCTCCTTCTCCCAATTCCCCTTATACTTCGGATGCCAAGGGTGGCAGTGGTAATGCTTTAAATCC AGATGGAAATTTTAATGATTCGCCGATTCTTCACAGATCTCCCAATCAATCTCCACTAGTTTCCCCTATTCCAATCGAGGGAAGAGGTTCAAGCATCGGT TATACGCAGTTGCTTTGTAATAATTCATGCCAAGGAAGTATTGAGAGCAATACATCCTTTACCACAGCTCAGCTACAACCGGAGAACTCCAGCACGAGCA CTGCTGATTATAGATACCCTCAACAAGTACCTGTGACTATGTTAAGTGACAGTCTCCGTAATCAACACAAAGATGTTGTTAAGCCGGAGAAGCACTATGG AGAGCATTTTGGCAACAGCAATTCCGACAAGGAATCAGTGATTCCTTTATATATTAATCCAAATGAGGGCTATAGTGATGAACTTTATGGTAAAAAGCCC TTGCATAAGGAAAGAATACTCCACTCTGGAAATCCTCCTTCACGTTTGGATGATGTAATCTGTCAACAGGCTGAATCTGATGGTATTACTTACACCCCTT TTGTACTGCCTCATGCTTTTTCTGATTCGCAGTTGCATGAGAGCGAAACTAGATCTGGTTACTGCTCACAAGAAGGAACTGGCTTATCTTTCTCCTTGAA CCATGCAAAGGCTCAGTCATCTTCAATGTTATTGTCTAGTGTCTCACAAGGGGGCCTTATGGAGGTACATAATGATTCCATTCTCCTTTATCCTCAAATA CAAAGTATGCTAACAAGTACTACCGAGTCATCCGAGTTGAACAAAAGGCAGGATGTTGCATCCTCTTCTCCATATTCCGAGTCATTCGGAACGAATGATC CCGTTCATAGGGATAACATTTTAATTGGAAAAAAGTACCCTGTTGCTCAAACTAATCTAAGTGGATCTAGCTTTGTAGTGAAGCATGCTGAGGACAATTC TTTGGCTTCAGAAGTGATTAAGAGAACTGAGGAAAAGAATCCTACTGAAATGAAGGATAGAAAAATTTACGAGGGCAAAACACCTGGTGCTAATAGGGTT CATGTCGCTGAATTGAATCTTTTGGACTCCTTCCCATCTAATAATTTGAATGCCAAGGTTAATATGCAAAACGATTGGGAGCTACCTCCTGAGGATAGCA TTGCTGTATCATTAGGCACACTGGGAGTCTGCAACAATAATCACATGGACAAGATCCCTTCTCATCTTGACCAGAGCCGAAGGACTAGTGACAGTAAGAA ATGTGCTGTGACTGATGGTTTGAATGATGAACAAGGTACTGGTTTTTCGTTGACAAGAAACTCTGACTCAAATGGCCCAACTTTCAAAGGCGGAGAAACC ACTCGTGACAAAATTTCTCTTGGAGATATGTTTGAACTGTCCATTGACTTAGATTCTTATAAAGCTTCACAAGTGCAACATTCCATGAATCCGAAGGGTA CAGGTCTTCATGAAAATCCAACTTTAAGCTCTGCATCTTTGTATCATGCTGTACCTCATGATGGTCATGGTCCAATTTCAAACTTCCCTATGAATCACCA GCCCAGTCCAAAGAAGAATATTTCTTTTAAGAAAATCCCTTCCTTAATTGATCATGACTCGATAACCAGTCCTGAACAGAAGGTTGATCAGGTTACCAGG GGACATTTTGCTGAAAAATCAAAAGCTGGCGATGTCATGTCGGAGCAATCAAGAAGACCAGAAAAGTGCAATGATGTAAATCAAGTGGAGGCATTTGTTG TAGTAAAAGAAGTGATTAGTGTTGTTCCTCCGGACATTTATTCTTCTTTGGCAACCACCCCAAATATTGTGGACGAAATTGGAAGTTGTGTTGTATCCTT GTCTCCTATGGAGGAAGAGAGCAACATCCTAGAGTCTGAACCTGAGGATTTTAAAGACGATGAATCAGACAGGAATGAATTCCTTACTGATGCAATGATA GCAGAAATGGAAGCAAGCATCTATGGTTTGCAGATAATAAGGAATGCTGATCTTGAAGAACTTCAGGAGTTAGGATCTGGTACTTATGGAACGGTTTATC ATGGAAAATGGCGGGGGTCGGACATTGCTATTAAGAGAATTAAGAAGAGCTGCTTTGCAGGGAGATATTCTGAGCAAGAAAGATTGACAAAAGACTTTTG GAGAGAGGCGCAAATCCTTTCAAATCTTCACCATCCTAATGTGGTTGCATTTTATGGGATAGTACCAGATGGATCTGAAGGAACCCTGGCGACCGTAACT GAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTCGTCAAGAAAGATAGATTACTAGATCGTCGTAAAAAGCTAATAATTGCAATGGATGCATCCTTTG GTATGGAATATTTGCATTCAAAAAATATTGTCCATTTTGATTTGAAGTGTGACAATTTGCTAGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGT TGGAGATTTTGGATTATCAAGAATTAAACGTAATACCCTGGTATCTGGTGGTGTTCGTGGAACCCTTCCATGGATGGCACCAGAACTGTTGAATGGCAGC AGCAGCAGGGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGATATTGACAGGGGAGGAACCTTATGCAGATATGCATTGTGGCG CCATTATTGGGGGGATTGTAAAAAACACTCTTCGGCCACCTATTCCGGAACGTTGCGATACTGAATGGAGGAAGCTCATGGAAGAGTGCTGGTCACCTAA TCCCGAAAGCCGACCATCATTCACAGAGATAACACGCAGGTTACGATCCATGTTTATGACCCTTCAAGCAAAGGCATTGCCAGGCATGTCAGTTAAGGCC TAGTGCTTCTTCTTGAAACCAAGGCATATTTTCCTGAAATTATGATTGTTATTACAAGACCTAATCATTCAAGACGAATCGCGATTGAGGTCGGCCGGCA TAAGTGCTTGAAGGGTTAGCATAATATTTGGCAATTGTTTCTTCTCATTTTTGTTAGCCATGATATCTTCATTTGTTTATTCTTGGTGTATAGTAGATTG TATCTCTCAATTTTTCTGCTTGGGCATTATCTAAATCTCTGGCAAAAGAATAGAGAAGGAAAAAAGGTTTGTTTAGTGTACATATGGAGAATTGTGCTTG TAAGATATGTTCTTGTTGATGTGAGTTTTCTCCCTCTCCTGCCATGTATTCTTCCTCTTTTTTGAGATCAGAATATTTATACAATTTTTGAGTGTGACTA TTTCTGTGAAGATATTTCTATCTTTCATCCCTTCATCCAAATTATTGAATTATTGAAA
• Tissue: pods
• Gene name: LI_gene_172824;
• Additional information: details;

Expression of Ll_transcript_342086

FPKM

• PAB: 1.8
• PNAB: 3.1
• PS1: 3.3
• PS2: 2.7
• PS3: 7.1
• PW1: 3.3
• PW2: 5.1
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342086

• Blastp: Serine/threonine-protein kinase EDR1 from Arabidopsis with 36.61% of identity
• Blastx: Dual specificity protein kinase splA from Dictyostelium with 38.52% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G08720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463733.1)
• Pfam: PB1 domain (PF00564.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;